| Chain sequence(s) |
H: EVQLVQSGGGVVQPGRSLRLSCSSSGFIFSSYAMYWVRQAPGKGLEWVAIIWDDGSDQHYADSVKGRFTISRNDSKNTLFLQMDSLRPEDTGVYFCARDGGHGFCSSASCFGPDYWGQGTPVTVSS
L: QSVLTQPPSASGTPGQRVTISCSGTSSNIGSSTVNWYQQLPGMAPKLLIYRDAMRPSGVPDRFSGSKSGASASLAIGGLQSEDETDYYCAAWDVSLNAYVFGTGTK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9715 | |
| 2 | V | H | -0.4649 | |
| 3 | Q | H | -0.6387 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2547 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.3476 | |
| 8 | G | H | -0.8375 | |
| 9 | G | H | -0.3296 | |
| 11 | G | H | 0.4565 | |
| 12 | V | H | 1.4102 | |
| 13 | V | H | -0.2684 | |
| 14 | Q | H | -1.7246 | |
| 15 | P | H | -2.1868 | |
| 16 | G | H | -1.9691 | |
| 17 | R | H | -2.7137 | |
| 18 | S | H | -1.8793 | |
| 19 | L | H | -1.1636 | |
| 20 | R | H | -1.5502 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2031 | |
| 23 | C | H | 0.0000 | |
| 24 | S | H | -0.2708 | |
| 25 | S | H | 0.0000 | |
| 26 | S | H | -0.5177 | |
| 27 | G | H | -0.7111 | |
| 28 | F | H | 0.5793 | |
| 29 | I | H | 1.8750 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.5100 | |
| 36 | S | H | -0.0458 | |
| 37 | Y | H | 0.0930 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | Y | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7845 | |
| 45 | A | H | -1.1908 | |
| 46 | P | H | -0.9724 | |
| 47 | G | H | -1.4589 | |
| 48 | K | H | -2.2029 | |
| 49 | G | H | -1.3862 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0353 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | I | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -1.0175 | |
| 58 | D | H | -1.3874 | |
| 59 | D | H | -2.4225 | |
| 62 | G | H | -1.7212 | |
| 63 | S | H | -1.4984 | |
| 64 | D | H | -1.8650 | |
| 65 | Q | H | -1.1918 | |
| 66 | H | H | -1.0482 | |
| 67 | Y | H | -1.0777 | |
| 68 | A | H | -1.3506 | |
| 69 | D | H | -2.3467 | |
| 70 | S | H | -1.8031 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6753 | |
| 74 | G | H | -1.8293 | |
| 75 | R | H | -1.6609 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9069 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.6957 | |
| 80 | R | H | -1.2751 | |
| 81 | N | H | -1.8148 | |
| 82 | D | H | -1.8933 | |
| 83 | S | H | -1.6272 | |
| 84 | K | H | -2.5068 | |
| 85 | N | H | -1.7437 | |
| 86 | T | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | F | H | -0.3061 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0443 | |
| 91 | M | H | 0.0000 | |
| 92 | D | H | -2.0026 | |
| 93 | S | H | -1.7678 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.5708 | |
| 96 | P | H | -1.9210 | |
| 97 | E | H | -2.3353 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6783 | |
| 100 | G | H | 0.0000 | |
| 101 | V | H | 0.1879 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | G | H | 0.0000 | |
| 110 | H | H | -0.2390 | |
| 111 | G | H | 0.3485 | |
| 111A | F | H | 1.2654 | |
| 111B | C | H | 1.0599 | |
| 111C | S | H | 0.4572 | |
| 112C | S | H | 0.4330 | |
| 112B | A | H | 0.5643 | |
| 112A | S | H | 0.0999 | |
| 112 | C | H | 0.2403 | |
| 113 | F | H | 0.4440 | |
| 114 | G | H | 0.0000 | |
| 115 | P | H | 0.0000 | |
| 116 | D | H | -0.0668 | |
| 117 | Y | H | 0.4103 | |
| 118 | W | H | 0.1709 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.5667 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | P | H | -0.1189 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0582 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4543 | |
| 128 | S | H | -0.6463 | |
| 1 | Q | L | -1.0461 | |
| 2 | S | L | -0.3924 | |
| 3 | V | L | 0.4242 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2232 | |
| 6 | Q | L | 0.0000 | |
| 7 | P | L | -0.5656 | |
| 8 | P | L | -0.8002 | |
| 9 | S | L | -1.0707 | |
| 11 | A | L | -1.0020 | |
| 12 | S | L | -1.2643 | |
| 13 | G | L | -1.5075 | |
| 14 | T | L | -1.1760 | |
| 15 | P | L | -1.4551 | |
| 16 | G | L | -1.8380 | |
| 17 | Q | L | -2.5645 | |
| 18 | R | L | -2.6457 | |
| 19 | V | L | -1.2089 | |
| 20 | T | L | -0.4935 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.3446 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.2728 | |
| 25 | G | L | -0.1722 | |
| 26 | T | L | -0.2596 | |
| 27 | S | L | -0.3231 | |
| 28 | S | L | 0.3478 | |
| 29 | N | L | 0.0000 | |
| 30 | I | L | 0.0000 | |
| 35 | G | L | -0.7241 | |
| 36 | S | L | -0.1954 | |
| 37 | S | L | -0.1247 | |
| 38 | T | L | -0.4287 | |
| 39 | V | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | L | L | -0.3895 | |
| 46 | P | L | -0.5287 | |
| 47 | G | L | -0.0106 | |
| 48 | M | L | 0.5534 | |
| 49 | A | L | 0.1598 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.3459 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1937 | |
| 56 | R | L | -0.7260 | |
| 57 | D | L | -0.7576 | |
| 65 | A | L | -0.3809 | |
| 66 | M | L | -0.0458 | |
| 67 | R | L | -1.1017 | |
| 68 | P | L | -0.5961 | |
| 69 | S | L | -0.6135 | |
| 70 | G | L | -0.9623 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.4229 | |
| 74 | D | L | -2.2578 | |
| 75 | R | L | -1.6248 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7632 | |
| 78 | G | L | -0.4422 | |
| 79 | S | L | -0.6169 | |
| 80 | K | L | -1.0329 | |
| 83 | S | L | -0.7946 | |
| 84 | G | L | -0.8785 | |
| 85 | A | L | -0.6520 | |
| 86 | S | L | -0.6598 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.4235 | |
| 89 | L | L | 0.0000 | |
| 90 | A | L | -0.5261 | |
| 91 | I | L | 0.0000 | |
| 92 | G | L | -1.8687 | |
| 93 | G | L | -1.8218 | |
| 94 | L | L | -2.0721 | |
| 95 | Q | L | -2.0536 | |
| 96 | S | L | -2.0297 | |
| 97 | E | L | -2.6692 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -3.0019 | |
| 100 | T | L | 0.0000 | |
| 101 | D | L | -1.3338 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | A | L | 0.0000 | |
| 106 | A | L | 0.0000 | |
| 107 | W | L | 0.6256 | |
| 108 | D | L | 0.0000 | |
| 109 | V | L | 1.5655 | |
| 110 | S | L | 0.9454 | |
| 113 | L | L | 1.1359 | |
| 114 | N | L | 0.6359 | |
| 115 | A | L | 0.2850 | |
| 116 | Y | L | 0.0000 | |
| 117 | V | L | 0.2904 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | T | L | -0.5783 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.1828 |