Project name: 2FB4

Status: done

Started: 2026-03-30 06:36:26
Settings
Chain sequence(s) H: EVQLVQSGGGVVQPGRSLRLSCSSSGFIFSSYAMYWVRQAPGKGLEWVAIIWDDGSDQHYADSVKGRFTISRNDSKNTLFLQMDSLRPEDTGVYFCARDGGHGFCSSASCFGPDYWGQGTPVTVSS
L: QSVLTQPPSASGTPGQRVTISCSGTSSNIGSSTVNWYQQLPGMAPKLLIYRDAMRPSGVPDRFSGSKSGASASLAIGGLQSEDETDYYCAAWDVSLNAYVFGTGTK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:51)
Show buried residues

Minimal score value
-3.0019
Maximal score value
1.875
Average score
-0.5328
Total score value
-123.6096

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9715
2 V H -0.4649
3 Q H -0.6387
4 L H 0.0000
5 V H 1.2547
6 Q H 0.0000
7 S H -0.3476
8 G H -0.8375
9 G H -0.3296
11 G H 0.4565
12 V H 1.4102
13 V H -0.2684
14 Q H -1.7246
15 P H -2.1868
16 G H -1.9691
17 R H -2.7137
18 S H -1.8793
19 L H -1.1636
20 R H -1.5502
21 L H 0.0000
22 S H -0.2031
23 C H 0.0000
24 S H -0.2708
25 S H 0.0000
26 S H -0.5177
27 G H -0.7111
28 F H 0.5793
29 I H 1.8750
30 F H 0.0000
35 S H -0.5100
36 S H -0.0458
37 Y H 0.0930
38 A H 0.0000
39 M H 0.0000
40 Y H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7845
45 A H -1.1908
46 P H -0.9724
47 G H -1.4589
48 K H -2.2029
49 G H -1.3862
50 L H 0.0000
51 E H -1.0353
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 I H 0.0000
56 I H 0.0000
57 W H -1.0175
58 D H -1.3874
59 D H -2.4225
62 G H -1.7212
63 S H -1.4984
64 D H -1.8650
65 Q H -1.1918
66 H H -1.0482
67 Y H -1.0777
68 A H -1.3506
69 D H -2.3467
70 S H -1.8031
71 V H 0.0000
72 K H -2.6753
74 G H -1.8293
75 R H -1.6609
76 F H 0.0000
77 T H -0.9069
78 I H 0.0000
79 S H -0.6957
80 R H -1.2751
81 N H -1.8148
82 D H -1.8933
83 S H -1.6272
84 K H -2.5068
85 N H -1.7437
86 T H 0.0000
87 L H 0.0000
88 F H -0.3061
89 L H 0.0000
90 Q H -1.0443
91 M H 0.0000
92 D H -2.0026
93 S H -1.7678
94 L H 0.0000
95 R H -2.5708
96 P H -1.9210
97 E H -2.3353
98 D H 0.0000
99 T H -0.6783
100 G H 0.0000
101 V H 0.1879
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 G H 0.0000
109 G H 0.0000
110 H H -0.2390
111 G H 0.3485
111A F H 1.2654
111B C H 1.0599
111C S H 0.4572
112C S H 0.4330
112B A H 0.5643
112A S H 0.0999
112 C H 0.2403
113 F H 0.4440
114 G H 0.0000
115 P H 0.0000
116 D H -0.0668
117 Y H 0.4103
118 W H 0.1709
119 G H 0.0000
120 Q H -0.5667
121 G H 0.0000
122 T H 0.0000
123 P H -0.1189
124 V H 0.0000
125 T H -0.0582
126 V H 0.0000
127 S H -0.4543
128 S H -0.6463
1 Q L -1.0461
2 S L -0.3924
3 V L 0.4242
4 L L 0.0000
5 T L -0.2232
6 Q L 0.0000
7 P L -0.5656
8 P L -0.8002
9 S L -1.0707
11 A L -1.0020
12 S L -1.2643
13 G L -1.5075
14 T L -1.1760
15 P L -1.4551
16 G L -1.8380
17 Q L -2.5645
18 R L -2.6457
19 V L -1.2089
20 T L -0.4935
21 I L 0.0000
22 S L -0.3446
23 C L 0.0000
24 S L -0.2728
25 G L -0.1722
26 T L -0.2596
27 S L -0.3231
28 S L 0.3478
29 N L 0.0000
30 I L 0.0000
35 G L -0.7241
36 S L -0.1954
37 S L -0.1247
38 T L -0.4287
39 V L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 L L -0.3895
46 P L -0.5287
47 G L -0.0106
48 M L 0.5534
49 A L 0.1598
50 P L 0.0000
51 K L -0.3459
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1937
56 R L -0.7260
57 D L -0.7576
65 A L -0.3809
66 M L -0.0458
67 R L -1.1017
68 P L -0.5961
69 S L -0.6135
70 G L -0.9623
71 V L 0.0000
72 P L -1.4229
74 D L -2.2578
75 R L -1.6248
76 F L 0.0000
77 S L -0.7632
78 G L -0.4422
79 S L -0.6169
80 K L -1.0329
83 S L -0.7946
84 G L -0.8785
85 A L -0.6520
86 S L -0.6598
87 A L 0.0000
88 S L -0.4235
89 L L 0.0000
90 A L -0.5261
91 I L 0.0000
92 G L -1.8687
93 G L -1.8218
94 L L -2.0721
95 Q L -2.0536
96 S L -2.0297
97 E L -2.6692
98 D L 0.0000
99 E L -3.0019
100 T L 0.0000
101 D L -1.3338
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 A L 0.0000
106 A L 0.0000
107 W L 0.6256
108 D L 0.0000
109 V L 1.5655
110 S L 0.9454
113 L L 1.1359
114 N L 0.6359
115 A L 0.2850
116 Y L 0.0000
117 V L 0.2904
118 F L 0.0000
119 G L 0.0000
120 T L -0.5783
121 G L 0.0000
122 T L 0.0000
123 K L -2.1828
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Laboratory of Theory of Biopolymers 2018