| Chain sequence(s) |
L: LEAARNTTTMLSKTLS
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 253 | L | L | 1.2088 | |
| 254 | E | L | -1.7189 | |
| 255 | A | L | -0.4036 | |
| 256 | A | L | -0.4941 | |
| 257 | R | L | -2.2753 | |
| 258 | N | L | -1.6146 | |
| 259 | T | L | -0.3169 | |
| 260 | T | L | -0.2801 | |
| 261 | T | L | 0.1049 | |
| 262 | M | L | 1.0927 | |
| 263 | L | L | 1.6682 | |
| 264 | S | L | -0.1950 | |
| 265 | K | L | -1.7441 | |
| 266 | T | L | -0.0965 | |
| 267 | L | L | 1.4950 | |
| 268 | S | L | 0.0736 |