Project name: a5aba3a710d8f36

Status: done

Started: 2025-10-09 05:12:51
Settings
Chain sequence(s) A: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
C: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
B: VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
D: VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:38)
Show buried residues

Minimal score value
-3.7758
Maximal score value
0.501
Average score
-0.7925
Total score value
-454.9231

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 0.3045
2 L A -0.3241
3 S A -0.7927
4 P A -0.8133
5 A A -0.5742
6 D A 0.0000
7 K A -1.0258
8 T A -0.7481
9 N A -0.8022
10 V A 0.0000
11 K A -1.6119
12 A A -1.2930
13 A A -1.2851
14 W A 0.0000
15 G A -1.7339
16 K A -2.3556
17 V A 0.0000
18 G A -1.2155
19 A A -0.9877
20 H A -1.7922
21 A A -2.0115
22 G A -2.8299
23 E A -2.7813
24 Y A 0.0000
25 G A 0.0000
26 A A 0.0000
27 E A -1.2703
28 A A 0.0000
29 L A 0.0000
30 E A -0.5481
31 R A 0.0000
32 M A 0.0000
33 F A 0.0000
34 L A 0.5010
35 S A 0.2531
36 F A 0.1534
37 P A -0.1558
38 T A -0.2683
39 T A 0.0000
40 K A -0.5791
41 T A -0.4435
42 Y A 0.0315
43 F A -0.3021
44 P A -0.7725
45 H A -1.2529
46 F A -1.0132
47 D A -1.9246
48 L A -1.1710
49 S A -1.2030
50 H A -1.5979
51 G A -1.5742
52 S A 0.0000
53 A A -1.3561
54 Q A -1.7195
55 V A 0.0000
56 K A -3.0171
57 G A -2.3484
58 H A -2.2088
59 G A 0.0000
60 K A -3.7758
61 K A -3.2006
62 V A -1.6285
63 A A 0.0000
64 D A -2.6039
65 A A -1.4488
66 L A 0.0000
67 T A -1.2903
68 N A -1.1708
69 A A 0.0000
70 V A 0.0000
71 A A -0.9909
72 H A -1.6982
73 V A -1.5526
74 D A -2.5248
75 D A -2.3455
76 M A 0.0000
77 P A -1.3080
78 N A -2.0606
79 A A -1.2509
80 L A 0.0000
81 S A -1.1229
82 A A -0.6826
83 L A -0.3065
84 S A 0.0000
85 D A -2.4855
86 L A -1.0516
87 H A -0.9317
88 A A 0.0000
89 H A -2.0403
90 K A -2.1461
91 L A -0.8103
92 R A -0.8881
93 V A -0.1211
94 D A 0.0000
95 P A -0.2104
96 V A -0.3151
97 N A -0.2403
98 F A -0.4150
99 K A -1.3847
100 L A -0.3661
101 L A -0.1053
102 S A -0.4952
103 H A 0.0000
104 C A 0.0000
105 L A 0.0000
106 L A 0.0000
107 V A 0.0000
108 T A 0.0000
109 L A 0.0000
110 A A 0.0000
111 A A -0.9931
112 H A -1.0879
113 L A 0.0000
114 P A -0.6562
115 A A -0.4561
116 E A -1.0520
117 F A 0.0000
118 T A -0.2206
119 P A -0.3087
120 A A -0.2582
121 V A -0.0779
122 H A 0.0000
123 A A -0.0944
124 S A 0.0000
125 L A 0.0000
126 D A -0.6074
127 K A -0.3398
128 F A 0.0000
129 L A 0.0000
130 A A -0.3903
131 S A 0.0091
132 V A 0.0000
133 S A -0.3198
134 T A 0.0240
135 V A 0.0000
136 L A 0.0000
137 T A -0.2856
138 S A -0.7530
139 K A -1.3996
140 Y A 0.0000
141 R A -2.3635
1 V B -0.4104
2 H B -1.1635
3 L B 0.0000
4 T B -1.2388
5 P B -1.7223
6 E B -2.4283
7 E B -1.8417
8 K B -1.8640
9 S B -1.3849
10 A B -1.0375
11 V B 0.0000
12 T B -0.8151
13 A B -0.6189
14 L B 0.0000
15 W B -0.5003
16 G B -1.0933
17 K B -1.8181
18 V B -1.2387
19 N B -1.7029
20 V B -0.6808
21 D B -2.5080
22 E B -2.5654
23 V B 0.0000
24 G B 0.0000
25 G B 0.0000
26 E B -1.1501
27 A B 0.0000
28 L B 0.0000
29 G B 0.0000
30 R B 0.0000
31 L B 0.0000
32 L B 0.0000
33 V B -0.0057
34 V B 0.0000
35 Y B 0.1832
36 P B -0.2726
37 W B -0.2296
38 T B 0.0000
39 Q B 0.0000
40 R B -0.8775
41 F B 0.3107
42 F B -0.7638
43 E B -2.0535
44 S B -1.3653
45 F B -1.3195
46 G B -1.9819
47 D B -2.6843
48 L B 0.0000
49 S B -1.1335
50 T B -1.0603
51 P B -1.0181
52 D B -2.1330
53 A B -1.6385
54 V B 0.0000
55 M B -1.0455
56 G B -1.4937
57 N B 0.0000
58 P B -1.2221
59 K B -1.9348
60 V B 0.0000
61 K B -2.2732
62 A B -1.9561
63 H B -1.6190
64 G B 0.0000
65 K B -2.3309
66 K B -2.1057
67 V B -0.9705
68 L B 0.0000
69 G B -1.1707
70 A B -0.8887
71 F B 0.0000
72 S B -0.7223
73 D B -1.4239
74 G B 0.0000
75 L B -0.6071
76 A B -0.9484
77 H B -1.7481
78 L B -1.4943
79 D B -2.6159
80 N B -2.5736
81 L B 0.0000
82 K B -2.1104
83 G B -1.6945
84 T B -1.3162
85 F B 0.0000
86 A B -0.8483
87 T B -0.3072
88 L B -0.5008
89 S B 0.0000
90 E B -2.2190
91 L B -1.0720
92 H B -1.1563
93 C B 0.0000
94 D B -3.0358
95 K B -2.3180
96 L B -0.5088
97 H B -1.3055
98 V B 0.0000
99 D B -0.7866
100 P B -1.1471
101 E B -1.3222
102 N B 0.0000
103 F B 0.0000
104 R B -1.1324
105 L B -0.4153
106 L B -0.0678
107 G B -0.2358
108 N B -0.3272
109 V B 0.0000
110 L B 0.0000
111 V B 0.0000
112 C B 0.0000
113 V B 0.0000
114 L B 0.0000
115 A B 0.0000
116 H B -0.8246
117 H B -1.2403
118 F B -1.2110
119 G B -1.4993
120 K B -2.3602
121 E B -1.8343
122 F B 0.0000
123 T B -0.7631
124 P B -0.2421
125 P B -0.2285
126 V B -0.3784
127 Q B 0.0000
128 A B 0.0000
129 A B 0.0000
130 Y B 0.0000
131 Q B 0.0000
132 K B -0.6974
133 V B 0.0000
134 V B 0.0000
135 A B -0.3918
136 G B -0.6293
137 V B -0.2991
138 A B 0.0000
139 N B -0.7911
140 A B 0.0000
141 L B -0.7208
142 A B 0.0000
143 H B -1.8717
144 K B -2.4832
145 Y B -1.3662
146 H B -1.3189
1 V C 0.3511
2 L C -0.2634
3 S C -0.6688
4 P C -0.6221
5 A C -0.5824
6 D C 0.0000
7 K C -1.0539
8 T C -0.7956
9 N C -0.8453
10 V C 0.0000
11 K C -1.7815
12 A C -1.3550
13 A C 0.0000
14 W C 0.0000
15 G C -1.8183
16 K C -2.4025
17 V C 0.0000
18 G C -1.3562
19 A C -1.1792
20 H C -1.8462
21 A C -1.8518
22 G C -2.4820
23 E C -2.6105
24 Y C 0.0000
25 G C 0.0000
26 A C 0.0000
27 E C -1.1382
28 A C 0.0000
29 L C 0.0000
30 E C -0.6315
31 R C 0.0000
32 M C 0.0000
33 F C 0.0000
34 L C 0.1191
35 S C 0.0748
36 F C 0.0650
37 P C -0.2530
38 T C -0.3412
39 T C 0.0000
40 K C -0.6402
41 T C -0.5403
42 Y C -0.0131
43 F C -0.2962
44 P C -0.7360
45 H C -1.1265
46 F C -0.8910
47 D C -1.5753
48 L C -1.0619
49 S C -1.1428
50 H C -1.5496
51 G C -1.4406
52 S C 0.0000
53 A C -1.1770
54 Q C -1.4788
55 V C 0.0000
56 K C -2.5255
57 G C -2.0370
58 H C -1.8131
59 G C 0.0000
60 K C -2.9193
61 K C -2.6093
62 V C -1.4189
63 A C 0.0000
64 D C -1.7804
65 A C -1.1468
66 L C 0.0000
67 T C -1.2457
68 N C -1.3160
69 A C 0.0000
70 V C 0.0000
71 A C -1.2526
72 H C -2.1660
73 V C -1.9038
74 D C -2.8875
75 D C -3.0525
76 M C 0.0000
77 P C -1.4920
78 N C -2.2580
79 A C -1.4972
80 L C 0.0000
81 S C -1.1551
82 A C -0.6805
83 L C -0.4089
84 S C 0.0000
85 D C -2.7292
86 L C -1.1723
87 H C -1.1255
88 A C 0.0000
89 H C -2.4967
90 K C -2.4214
91 L C -1.0793
92 R C -1.0030
93 V C -0.2088
94 D C 0.0000
95 P C -0.1631
96 V C -0.2565
97 N C -0.1951
98 F C -0.3013
99 K C -1.2039
100 L C -0.2553
101 L C -0.0192
102 S C -0.4119
103 H C 0.0000
104 C C 0.0000
105 L C 0.0000
106 L C 0.0000
107 V C 0.0000
108 T C 0.0000
109 L C 0.0000
110 A C 0.0000
111 A C -1.1070
112 H C -0.9096
113 L C 0.0000
114 P C -0.6419
115 A C -0.3825
116 E C -0.8416
117 F C 0.0000
118 T C -0.1813
119 P C -0.2779
120 A C -0.2139
121 V C -0.0960
122 H C 0.0000
123 A C -0.0917
124 S C 0.0000
125 L C 0.0000
126 D C -0.5850
127 K C -0.3171
128 F C 0.0000
129 L C 0.0000
130 A C -0.3685
131 S C 0.0016
132 V C 0.0000
133 S C -0.2758
134 T C -0.0032
135 V C 0.0000
136 L C 0.0000
137 T C -0.4227
138 S C -0.9865
139 K C -1.8940
140 Y C 0.0000
141 R C -2.4501
1 V D -0.4553
2 H D -1.1932
3 L D 0.0000
4 T D -1.2038
5 P D -1.6144
6 E D -2.3064
7 E D -1.7892
8 K D -1.5701
9 S D -1.2178
10 A D -0.8168
11 V D 0.0000
12 T D -0.7730
13 A D -0.6031
14 L D 0.0000
15 W D -0.6730
16 G D -1.2115
17 K D -1.9230
18 V D 0.0000
19 N D -2.1322
20 V D -1.1079
21 D D -2.8299
22 E D -2.9606
23 V D 0.0000
24 G D 0.0000
25 G D 0.0000
26 E D -1.2258
27 A D 0.0000
28 L D 0.0000
29 G D 0.0000
30 R D 0.0000
31 L D 0.0000
32 L D 0.0000
33 V D -0.0235
34 V D 0.0000
35 Y D 0.1571
36 P D -0.1524
37 W D -0.1810
38 T D 0.0000
39 Q D -0.4075
40 R D -0.7745
41 F D 0.1802
42 F D -0.8422
43 E D -2.0504
44 S D -1.4099
45 F D -1.4366
46 G D -2.0085
47 D D -2.7131
48 L D 0.0000
49 S D -1.1682
50 T D -1.1033
51 P D -1.0161
52 D D -2.1234
53 A D -1.6373
54 V D 0.0000
55 M D -1.0660
56 G D -1.5139
57 N D 0.0000
58 P D -1.3814
59 K D -2.2680
60 V D 0.0000
61 K D -2.5362
62 A D -2.1963
63 H D -1.7842
64 G D 0.0000
65 K D -2.5946
66 K D -2.2892
67 V D -1.1303
68 L D 0.0000
69 G D -1.1550
70 A D -1.0259
71 F D 0.0000
72 S D -0.8342
73 D D -1.4909
74 G D 0.0000
75 L D 0.0000
76 A D -0.9556
77 H D -1.6508
78 L D -1.5129
79 D D -2.3859
80 N D -1.9987
81 L D 0.0000
82 K D -2.1281
83 G D -1.6664
84 T D -1.2779
85 F D 0.0000
86 A D -0.9007
87 T D -0.4004
88 L D -0.4885
89 S D 0.0000
90 E D -2.0153
91 L D -0.9622
92 H D -1.0497
93 C D 0.0000
94 D D -2.8860
95 K D -2.3345
96 L D -0.7439
97 H D -1.0981
98 V D -0.4803
99 D D -0.6482
100 P D -1.0886
101 E D -1.2810
102 N D 0.0000
103 F D -0.5676
104 R D -1.0746
105 L D -0.4075
106 L D -0.0854
107 G D 0.0000
108 N D -0.3745
109 V D 0.0000
110 L D 0.0000
111 V D 0.0000
112 C D 0.0000
113 V D 0.0000
114 L D 0.0000
115 A D 0.0000
116 H D -0.7950
117 H D -1.2847
118 F D -1.4839
119 G D -1.7724
120 K D -2.7365
121 E D -2.6511
122 F D 0.0000
123 T D -1.0525
124 P D -0.5031
125 P D -0.1205
126 V D -0.4758
127 Q D 0.0000
128 A D 0.0000
129 A D 0.0000
130 Y D 0.0000
131 Q D 0.0000
132 K D -0.7620
133 V D 0.0000
134 V D 0.0000
135 A D -0.4290
136 G D -0.5477
137 V D 0.0000
138 A D 0.0000
139 N D -0.8960
140 A D 0.0000
141 L D 0.0000
142 A D 0.0000
143 H D -2.1392
144 K D -2.2564
145 Y D -1.2463
146 H D -1.1227
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Laboratory of Theory of Biopolymers 2018