| Chain sequence(s) |
A: AMHVAQPAVVLASSRGIASFVCEYAAGCKNFFWKTFTSCATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTGLYICKVELMYPPPYYLGIGNGTQIYVIDPEPCPDSD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.7045 | |
| 2 | M | A | 0.3237 | |
| 3 | H | A | -0.6015 | |
| 4 | V | A | 0.0000 | |
| 5 | A | A | -0.5373 | |
| 6 | Q | A | -0.1671 | |
| 7 | P | A | 0.1974 | |
| 8 | A | A | 0.4829 | |
| 9 | V | A | 1.9109 | |
| 10 | V | A | 1.6593 | |
| 11 | L | A | 2.3718 | |
| 12 | A | A | 0.0000 | |
| 13 | S | A | -0.2703 | |
| 14 | S | A | -1.3424 | |
| 15 | R | A | -2.3537 | |
| 16 | G | A | 0.0000 | |
| 17 | I | A | -0.6415 | |
| 18 | A | A | 0.0000 | |
| 19 | S | A | -0.0668 | |
| 20 | F | A | 0.0000 | |
| 21 | V | A | -0.2779 | |
| 22 | C | A | 0.0000 | |
| 23 | E | A | -1.4496 | |
| 24 | Y | A | 0.0000 | |
| 25 | A | A | -0.8535 | |
| 26 | A | A | -0.7902 | |
| 27 | G | A | -0.4792 | |
| 28 | C | A | -0.2870 | |
| 29 | K | A | -1.2004 | |
| 30 | N | A | 0.1429 | |
| 31 | F | A | 2.1269 | |
| 32 | F | A | 2.7331 | |
| 33 | W | A | 1.8962 | |
| 34 | K | A | 0.1694 | |
| 35 | T | A | 1.1022 | |
| 36 | F | A | 2.0137 | |
| 37 | T | A | 0.6857 | |
| 38 | S | A | 0.2933 | |
| 39 | C | A | 0.2179 | |
| 40 | A | A | 0.0000 | |
| 41 | T | A | 0.1994 | |
| 42 | E | A | -0.1653 | |
| 43 | V | A | 0.0000 | |
| 44 | R | A | -0.7302 | |
| 45 | V | A | 0.0000 | |
| 46 | T | A | 0.0000 | |
| 47 | V | A | 0.0000 | |
| 48 | L | A | -0.2169 | |
| 49 | R | A | -0.6589 | |
| 50 | Q | A | -0.8651 | |
| 51 | A | A | -1.0544 | |
| 52 | D | A | -2.1084 | |
| 53 | S | A | -1.4281 | |
| 54 | Q | A | -1.4890 | |
| 55 | V | A | -0.0963 | |
| 56 | T | A | -0.6268 | |
| 57 | E | A | -1.5216 | |
| 58 | V | A | -0.5478 | |
| 59 | C | A | 0.0000 | |
| 60 | A | A | -0.4331 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | -0.3250 | |
| 63 | Y | A | 0.0000 | |
| 64 | M | A | -0.5016 | |
| 65 | M | A | -0.7619 | |
| 66 | G | A | -1.4742 | |
| 67 | N | A | -2.2862 | |
| 68 | E | A | -2.5073 | |
| 69 | L | A | 0.0000 | |
| 70 | T | A | -0.4983 | |
| 71 | F | A | -0.1082 | |
| 72 | L | A | 0.3856 | |
| 73 | D | A | -1.7089 | |
| 74 | D | A | -2.1566 | |
| 75 | S | A | -1.1032 | |
| 76 | I | A | -0.5512 | |
| 77 | C | A | 0.0000 | |
| 78 | T | A | -0.4578 | |
| 79 | G | A | -0.7467 | |
| 80 | T | A | -1.2825 | |
| 81 | S | A | -1.4708 | |
| 82 | S | A | -1.5017 | |
| 83 | G | A | -1.0248 | |
| 84 | N | A | -1.1158 | |
| 85 | Q | A | -1.5231 | |
| 86 | V | A | 0.0000 | |
| 87 | N | A | -1.2104 | |
| 88 | L | A | 0.0000 | |
| 89 | T | A | -0.2708 | |
| 90 | I | A | 0.0000 | |
| 91 | Q | A | -1.0792 | |
| 92 | G | A | -1.3695 | |
| 93 | L | A | 0.0000 | |
| 94 | R | A | -1.9361 | |
| 95 | A | A | -0.3886 | |
| 96 | M | A | 0.3898 | |
| 97 | D | A | -0.1648 | |
| 98 | T | A | 0.3705 | |
| 99 | G | A | -0.1607 | |
| 100 | L | A | 0.0725 | |
| 101 | Y | A | 0.0000 | |
| 102 | I | A | 0.1092 | |
| 103 | C | A | 0.0000 | |
| 104 | K | A | 0.1453 | |
| 105 | V | A | 0.0000 | |
| 106 | E | A | 0.5664 | |
| 107 | L | A | 0.0000 | |
| 108 | M | A | 1.1078 | |
| 109 | Y | A | 1.3963 | |
| 110 | P | A | 0.6782 | |
| 111 | P | A | 0.5993 | |
| 112 | P | A | 0.7176 | |
| 113 | Y | A | 1.9569 | |
| 114 | Y | A | 1.8046 | |
| 115 | L | A | 1.3135 | |
| 116 | G | A | 0.0000 | |
| 117 | I | A | 1.3523 | |
| 118 | G | A | 0.0000 | |
| 119 | N | A | -0.9709 | |
| 120 | G | A | 0.0000 | |
| 121 | T | A | 0.0000 | |
| 122 | Q | A | 0.4948 | |
| 123 | I | A | 0.0000 | |
| 124 | Y | A | 1.4534 | |
| 125 | V | A | 0.0000 | |
| 126 | I | A | 0.4681 | |
| 127 | D | A | -2.0572 | |
| 128 | P | A | -1.8226 | |
| 129 | E | A | -2.1704 | |
| 130 | P | A | -1.4387 | |
| 131 | C | A | -0.5566 | |
| 132 | P | A | -1.3949 | |
| 133 | D | A | -2.3419 | |
| 134 | S | A | -1.8726 | |
| 135 | D | A | -2.4104 |