| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGITFSINTMGWYRQAPGKQRELVSLISSIGDTYYADSVRGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCKRFRTAAQGTDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1757 | |
| 2 | V | A | -1.3460 | |
| 3 | Q | A | -1.2841 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.0894 | |
| 6 | E | A | 0.3409 | |
| 7 | S | A | -0.0932 | |
| 8 | G | A | -0.6995 | |
| 9 | G | A | 0.1524 | |
| 10 | G | A | 0.6998 | |
| 11 | L | A | 1.4326 | |
| 12 | V | A | -0.0338 | |
| 13 | Q | A | -1.3013 | |
| 14 | P | A | -1.5687 | |
| 15 | G | A | -1.4111 | |
| 16 | G | A | -0.9991 | |
| 17 | S | A | -1.2658 | |
| 18 | L | A | -0.9053 | |
| 19 | R | A | -1.8956 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3794 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1438 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0764 | |
| 26 | G | A | -1.3529 | |
| 27 | I | A | -0.4942 | |
| 28 | T | A | 0.0018 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | 0.0492 | |
| 31 | I | A | 1.3265 | |
| 32 | N | A | 0.0000 | |
| 33 | T | A | 0.0375 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.3079 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.8423 | |
| 40 | A | A | -1.7312 | |
| 41 | P | A | -1.3782 | |
| 42 | G | A | -1.8715 | |
| 43 | K | A | -3.1990 | |
| 44 | Q | A | -3.2486 | |
| 45 | R | A | -3.0067 | |
| 46 | E | A | -2.2945 | |
| 47 | L | A | -0.2851 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | L | A | 0.4885 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.2279 | |
| 53 | S | A | 0.6931 | |
| 54 | I | A | 1.4933 | |
| 55 | G | A | -0.1657 | |
| 56 | D | A | -1.1602 | |
| 57 | T | A | -0.0989 | |
| 58 | Y | A | 0.4600 | |
| 59 | Y | A | -0.2245 | |
| 60 | A | A | -1.0916 | |
| 61 | D | A | -2.3736 | |
| 62 | S | A | -1.7376 | |
| 63 | V | A | 0.0000 | |
| 64 | R | A | -2.5760 | |
| 65 | G | A | -1.8238 | |
| 66 | R | A | -1.6143 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.7154 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6141 | |
| 71 | R | A | -1.0964 | |
| 72 | D | A | -1.6577 | |
| 73 | N | A | -1.9255 | |
| 74 | S | A | -1.7852 | |
| 75 | K | A | -2.5024 | |
| 76 | N | A | -1.9285 | |
| 77 | T | A | -1.0778 | |
| 78 | L | A | 0.0000 | |
| 79 | Y | A | -0.5456 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2690 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4496 | |
| 84 | S | A | -1.2880 | |
| 85 | L | A | 0.0000 | |
| 86 | R | A | -2.3037 | |
| 87 | A | A | -1.7044 | |
| 88 | E | A | -2.2420 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.4122 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | 0.4873 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | 0.0787 | |
| 95 | C | A | 0.0000 | |
| 96 | K | A | 0.0000 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | -0.7405 | |
| 99 | R | A | -2.0658 | |
| 100 | T | A | -0.9466 | |
| 101 | A | A | -0.5571 | |
| 102 | A | A | -0.3593 | |
| 103 | Q | A | -0.8488 | |
| 104 | G | A | -1.2281 | |
| 105 | T | A | -1.1102 | |
| 106 | D | A | -0.9874 | |
| 107 | Y | A | -0.0840 | |
| 108 | W | A | 0.3379 | |
| 109 | G | A | -0.0728 | |
| 110 | Q | A | -0.8958 | |
| 111 | G | A | 0.0582 | |
| 112 | T | A | 0.5518 | |
| 113 | L | A | 1.6460 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | 0.3627 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.6661 | |
| 118 | S | A | -0.4494 |