Project name: query_structure

Status: done

Started: 2026-03-17 00:59:44
Settings
Chain sequence(s) A: RRTCHCRSRCLRRESNSGSCNINGRIFSLCCR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-3.2564
Maximal score value
0.58
Average score
-1.3078
Total score value
-41.8504

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -2.7130
2 R A -3.1606
3 T A -1.9264
4 C A -1.5509
5 H A -1.3186
6 C A -0.5999
7 R A -1.2901
8 S A -1.1124
9 R A -1.7677
10 C A -1.2912
11 L A -0.6346
12 R A -2.4406
13 R A -2.9276
14 E A -2.4878
15 S A -2.0150
16 N A -2.2344
17 S A -1.1651
18 G A -0.4147
19 S A -0.1563
20 C A -0.1712
21 N A -0.9893
22 I A -0.6711
23 N A -1.6493
24 G A -1.5158
25 R A -1.6433
26 I A 0.5800
27 F A -0.2509
28 S A -0.6856
29 L A -0.3906
30 C A 0.0000
31 C A 0.0000
32 R A -3.2564
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Laboratory of Theory of Biopolymers 2018