| Chain sequence(s) |
A: SIIGDIMGILGNIPQVIQIDMSIVKAFKGNK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.4055 | |
| 2 | I | A | 1.6686 | |
| 3 | I | A | 1.2335 | |
| 4 | G | A | 0.1986 | |
| 5 | D | A | -0.4762 | |
| 6 | I | A | 0.9311 | |
| 7 | M | A | 0.4448 | |
| 8 | G | A | 0.0641 | |
| 9 | I | A | 1.4139 | |
| 10 | L | A | 0.7661 | |
| 11 | G | A | -0.4569 | |
| 12 | N | A | -1.1226 | |
| 13 | I | A | 0.3127 | |
| 14 | P | A | 0.3677 | |
| 15 | Q | A | -0.0773 | |
| 16 | V | A | 1.8903 | |
| 17 | I | A | 2.0356 | |
| 18 | Q | A | 0.8671 | |
| 19 | I | A | 1.2831 | |
| 20 | D | A | 0.1654 | |
| 21 | M | A | 1.0096 | |
| 22 | S | A | 0.0000 | |
| 23 | I | A | 1.8205 | |
| 24 | V | A | 1.5440 | |
| 25 | K | A | 0.4279 | |
| 26 | A | A | 1.0551 | |
| 27 | F | A | 1.4741 | |
| 28 | K | A | -0.8815 | |
| 29 | G | A | -1.2532 | |
| 30 | N | A | -1.5597 |