Project name: Thiago da Silva

Status: done

Started: 2026-07-15 04:24:59
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Chain sequence(s) H: TVTLDESGGGLQTPGGGLSLVCKASGFTFSDRGMYWVRQAPGKGLEFVAGISGSSGRHTKYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTATYFCAKGTSGYSNSVGEIDVWGHGTEVIVSS
L: LTQPSSVSANLGGTVKLTCSGGNYRYGWYQQKSPGSAPVTLIYSNDKRPSDIPSRFSGSKSGSTGTLTITGVQAEDEAVYFCGDWDKTYNAGIFGAGTTLTVL
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:11)
Show buried residues

Minimal score value
-3.2705
Maximal score value
1.7234
Average score
-0.6452
Total score value
-146.4516

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 T H -0.3393
2 V H 0.6714
3 T H -0.4138
4 L H 0.0000
5 D H -2.5932
6 E H 0.0000
7 S H -1.4223
8 G H -0.7727
9 G H -0.5093
11 G H 0.1139
12 L H 1.2942
13 Q H 0.1473
14 T H -0.4995
15 P H -1.1270
16 G H -1.6844
17 G H -1.4167
18 G H -1.4917
19 L H 0.0000
20 S H -0.8053
21 L H 0.0000
22 V H -1.2596
23 C H 0.0000
24 K H -2.8165
25 A H -1.2115
26 S H -0.4255
27 G H 0.5469
28 F H 1.7234
29 T H 0.3721
30 F H 0.0000
35 S H -1.1108
36 D H -1.3770
37 R H -0.6777
38 G H -0.6925
39 M H 0.0000
40 Y H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 A H -1.2691
46 P H -1.2883
47 G H -1.5619
48 K H -2.1771
49 G H -1.1756
50 L H 0.0000
51 E H -0.3592
52 F H 0.0000
53 V H 0.0000
54 A H 0.0000
55 G H 0.0000
56 I H -0.7266
57 S H -1.2345
58 G H 0.0000
59 S H -1.2219
60 S H -1.2262
62 G H -1.7479
63 R H -2.5395
64 H H -2.0689
65 T H -1.1117
66 K H -0.6046
67 Y H -0.5965
68 G H -0.4410
69 A H -0.4769
70 A H -1.2487
71 V H 0.0000
72 K H -2.1801
74 G H -1.8157
75 R H -2.2168
76 A H 0.0000
77 T H -1.0865
78 I H 0.0000
79 S H -1.4240
80 R H -2.0291
81 D H -2.3266
82 N H -1.9752
83 G H -1.6947
84 Q H -2.2058
85 S H -1.6517
86 T H -2.2518
87 V H 0.0000
88 R H -2.2850
89 L H 0.0000
90 Q H -1.1056
91 L H 0.0000
92 N H -2.2329
93 N H -2.4992
94 L H 0.0000
95 R H -2.8772
96 A H -1.6355
97 E H -2.4173
98 D H 0.0000
99 T H -0.7466
100 A H -0.9247
101 T H -0.9966
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H -0.2828
107 G H 0.0000
108 T H -0.2517
109 S H 0.0000
110 G H -0.1327
111 Y H 0.6544
111A S H -0.3716
112B N H -1.2866
112A S H -0.9257
112 V H -0.4541
113 G H -0.2414
114 E H 0.0000
115 I H 0.0000
116 D H -0.3240
117 V H 0.0000
118 W H 0.0000
119 G H 0.0000
120 H H -1.5741
121 G H -1.4195
122 T H -1.4942
123 E H -1.5569
124 V H 0.0000
125 I H 0.7911
126 V H 0.0000
127 S H -0.1112
128 S H -0.1081
4 L L 0.3984
5 T L -0.0179
6 Q L 0.0000
7 P L -0.2361
8 S L -0.2587
9 S L -0.2226
11 V L -0.1886
12 S L -0.4039
13 A L -0.2340
14 N L -0.2297
15 L L 0.5647
16 G L -0.2728
17 G L -0.4879
18 T L -0.6581
19 V L 0.0000
20 K L -1.6606
21 L L 0.0000
22 T L -0.7072
23 C L 0.0000
24 S L -0.5568
25 G L -0.2219
26 G L -0.5662
27 N L -0.6456
28 Y L 0.2346
38 R L -0.8196
39 Y L 0.0000
40 G L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.4759
44 Q L 0.0000
45 K L -2.3169
45A S L -1.5682
46 P L -1.2822
47 G L -1.2950
48 S L -0.9286
49 A L -0.5763
50 P L 0.0000
51 V L 0.4564
52 T L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0000
56 S L -1.2487
57 N L -1.9262
65 D L -3.2705
66 K L -3.0177
67 R L -2.4798
68 P L -1.3805
69 S L -1.4305
70 D L -2.0074
71 I L -0.9579
72 P L -0.7279
74 S L -0.4536
75 R L 0.0000
76 F L 0.0000
77 S L -1.3249
78 G L -2.0910
79 S L -1.9223
80 K L -2.2903
83 S L -1.2119
84 G L -0.9060
85 S L -0.7495
86 T L -0.8819
87 G L 0.0000
88 T L -1.2778
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 T L -0.5767
93 G L -0.4469
94 V L 0.0000
95 Q L -1.0245
96 A L -1.1034
97 E L -2.6178
98 D L 0.0000
99 E L -2.4666
100 A L 0.0000
101 V L -0.5927
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 G L 0.2205
106 D L 0.0000
107 W L -0.2203
108 D L -0.6260
109 K L -1.6050
110 T L -0.3881
113 Y L 0.6603
114 N L -0.2899
115 A L 0.0969
116 G L 0.2172
117 I L 0.7726
118 F L 0.5378
119 G L 0.0000
120 A L -0.1207
121 G L 0.0000
122 T L 0.0000
123 T L -0.5610
124 L L 0.0000
125 T L -0.1149
126 V L -0.0123
127 L L 1.0643
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Laboratory of Theory of Biopolymers 2018