| Chain sequence(s) |
H: TVTLDESGGGLQTPGGGLSLVCKASGFTFSDRGMYWVRQAPGKGLEFVAGISGSSGRHTKYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTATYFCAKGTSGYSNSVGEIDVWGHGTEVIVSS
L: LTQPSSVSANLGGTVKLTCSGGNYRYGWYQQKSPGSAPVTLIYSNDKRPSDIPSRFSGSKSGSTGTLTITGVQAEDEAVYFCGDWDKTYNAGIFGAGTTLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | H | -0.3393 | |
| 2 | V | H | 0.6714 | |
| 3 | T | H | -0.4138 | |
| 4 | L | H | 0.0000 | |
| 5 | D | H | -2.5932 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -1.4223 | |
| 8 | G | H | -0.7727 | |
| 9 | G | H | -0.5093 | |
| 11 | G | H | 0.1139 | |
| 12 | L | H | 1.2942 | |
| 13 | Q | H | 0.1473 | |
| 14 | T | H | -0.4995 | |
| 15 | P | H | -1.1270 | |
| 16 | G | H | -1.6844 | |
| 17 | G | H | -1.4167 | |
| 18 | G | H | -1.4917 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.8053 | |
| 21 | L | H | 0.0000 | |
| 22 | V | H | -1.2596 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -2.8165 | |
| 25 | A | H | -1.2115 | |
| 26 | S | H | -0.4255 | |
| 27 | G | H | 0.5469 | |
| 28 | F | H | 1.7234 | |
| 29 | T | H | 0.3721 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.1108 | |
| 36 | D | H | -1.3770 | |
| 37 | R | H | -0.6777 | |
| 38 | G | H | -0.6925 | |
| 39 | M | H | 0.0000 | |
| 40 | Y | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | A | H | -1.2691 | |
| 46 | P | H | -1.2883 | |
| 47 | G | H | -1.5619 | |
| 48 | K | H | -2.1771 | |
| 49 | G | H | -1.1756 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.3592 | |
| 52 | F | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | -0.7266 | |
| 57 | S | H | -1.2345 | |
| 58 | G | H | 0.0000 | |
| 59 | S | H | -1.2219 | |
| 60 | S | H | -1.2262 | |
| 62 | G | H | -1.7479 | |
| 63 | R | H | -2.5395 | |
| 64 | H | H | -2.0689 | |
| 65 | T | H | -1.1117 | |
| 66 | K | H | -0.6046 | |
| 67 | Y | H | -0.5965 | |
| 68 | G | H | -0.4410 | |
| 69 | A | H | -0.4769 | |
| 70 | A | H | -1.2487 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.1801 | |
| 74 | G | H | -1.8157 | |
| 75 | R | H | -2.2168 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -1.0865 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -1.4240 | |
| 80 | R | H | -2.0291 | |
| 81 | D | H | -2.3266 | |
| 82 | N | H | -1.9752 | |
| 83 | G | H | -1.6947 | |
| 84 | Q | H | -2.2058 | |
| 85 | S | H | -1.6517 | |
| 86 | T | H | -2.2518 | |
| 87 | V | H | 0.0000 | |
| 88 | R | H | -2.2850 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1056 | |
| 91 | L | H | 0.0000 | |
| 92 | N | H | -2.2329 | |
| 93 | N | H | -2.4992 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.8772 | |
| 96 | A | H | -1.6355 | |
| 97 | E | H | -2.4173 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7466 | |
| 100 | A | H | -0.9247 | |
| 101 | T | H | -0.9966 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | -0.2828 | |
| 107 | G | H | 0.0000 | |
| 108 | T | H | -0.2517 | |
| 109 | S | H | 0.0000 | |
| 110 | G | H | -0.1327 | |
| 111 | Y | H | 0.6544 | |
| 111A | S | H | -0.3716 | |
| 112B | N | H | -1.2866 | |
| 112A | S | H | -0.9257 | |
| 112 | V | H | -0.4541 | |
| 113 | G | H | -0.2414 | |
| 114 | E | H | 0.0000 | |
| 115 | I | H | 0.0000 | |
| 116 | D | H | -0.3240 | |
| 117 | V | H | 0.0000 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | H | H | -1.5741 | |
| 121 | G | H | -1.4195 | |
| 122 | T | H | -1.4942 | |
| 123 | E | H | -1.5569 | |
| 124 | V | H | 0.0000 | |
| 125 | I | H | 0.7911 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.1112 | |
| 128 | S | H | -0.1081 | |
| 4 | L | L | 0.3984 | |
| 5 | T | L | -0.0179 | |
| 6 | Q | L | 0.0000 | |
| 7 | P | L | -0.2361 | |
| 8 | S | L | -0.2587 | |
| 9 | S | L | -0.2226 | |
| 11 | V | L | -0.1886 | |
| 12 | S | L | -0.4039 | |
| 13 | A | L | -0.2340 | |
| 14 | N | L | -0.2297 | |
| 15 | L | L | 0.5647 | |
| 16 | G | L | -0.2728 | |
| 17 | G | L | -0.4879 | |
| 18 | T | L | -0.6581 | |
| 19 | V | L | 0.0000 | |
| 20 | K | L | -1.6606 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.7072 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.5568 | |
| 25 | G | L | -0.2219 | |
| 26 | G | L | -0.5662 | |
| 27 | N | L | -0.6456 | |
| 28 | Y | L | 0.2346 | |
| 38 | R | L | -0.8196 | |
| 39 | Y | L | 0.0000 | |
| 40 | G | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.4759 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -2.3169 | |
| 45A | S | L | -1.5682 | |
| 46 | P | L | -1.2822 | |
| 47 | G | L | -1.2950 | |
| 48 | S | L | -0.9286 | |
| 49 | A | L | -0.5763 | |
| 50 | P | L | 0.0000 | |
| 51 | V | L | 0.4564 | |
| 52 | T | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0000 | |
| 56 | S | L | -1.2487 | |
| 57 | N | L | -1.9262 | |
| 65 | D | L | -3.2705 | |
| 66 | K | L | -3.0177 | |
| 67 | R | L | -2.4798 | |
| 68 | P | L | -1.3805 | |
| 69 | S | L | -1.4305 | |
| 70 | D | L | -2.0074 | |
| 71 | I | L | -0.9579 | |
| 72 | P | L | -0.7279 | |
| 74 | S | L | -0.4536 | |
| 75 | R | L | 0.0000 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.3249 | |
| 78 | G | L | -2.0910 | |
| 79 | S | L | -1.9223 | |
| 80 | K | L | -2.2903 | |
| 83 | S | L | -1.2119 | |
| 84 | G | L | -0.9060 | |
| 85 | S | L | -0.7495 | |
| 86 | T | L | -0.8819 | |
| 87 | G | L | 0.0000 | |
| 88 | T | L | -1.2778 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | T | L | -0.5767 | |
| 93 | G | L | -0.4469 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -1.0245 | |
| 96 | A | L | -1.1034 | |
| 97 | E | L | -2.6178 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -2.4666 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.5927 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | G | L | 0.2205 | |
| 106 | D | L | 0.0000 | |
| 107 | W | L | -0.2203 | |
| 108 | D | L | -0.6260 | |
| 109 | K | L | -1.6050 | |
| 110 | T | L | -0.3881 | |
| 113 | Y | L | 0.6603 | |
| 114 | N | L | -0.2899 | |
| 115 | A | L | 0.0969 | |
| 116 | G | L | 0.2172 | |
| 117 | I | L | 0.7726 | |
| 118 | F | L | 0.5378 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.1207 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | T | L | -0.5610 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.1149 | |
| 126 | V | L | -0.0123 | |
| 127 | L | L | 1.0643 |