Project name: ANX [mutate: YD100D] [mutate: AG107D, DY100D] [mutate: YR100D, GA107D]

Status: done

Started: 2025-12-31 22:55:35
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Chain sequence(s) D: ISEVQLVESGGGLVQPGGSLRLSCAASGFNVYYSSIHWVRQAPGKGLEWVAYISPYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYYSSWPYGWVGHYRALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues YR100D,GA107D
Energy difference between WT (input) and mutated protein (by FoldX) 0.1659 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:56)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:14)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:12)
Show buried residues

Minimal score value
-2.8088
Maximal score value
2.3229
Average score
-0.4471
Total score value
-105.5066

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
-1 I D 0.9713
0 S D -0.3554
1 E D -1.7242
2 V D -0.7297
3 Q D -1.0678
4 L D 0.0000
5 V D 1.1739
6 E D 0.3296
7 S D -0.1056
8 G D -0.7978
9 G D -0.2696
10 G D 0.1572
11 L D 0.2776
12 V D -0.3182
13 Q D -1.0754
14 P D -1.3240
15 G D -1.3451
16 G D -1.0380
17 S D -0.9536
18 L D -0.8145
19 R D -1.3263
20 L D 0.0000
21 S D -0.1634
22 C D 0.0000
23 A D -0.0247
24 A D -0.4992
25 S D -0.8661
26 G D -0.9464
27 F D -0.2312
28 N D -0.6155
29 V D 0.0000
30 Y D 1.1434
31 Y D 1.5318
32 S D 0.0000
33 S D 0.0000
34 I D 0.0000
35 H D 0.0000
36 W D 0.0000
37 V D 0.0000
38 R D 0.0000
39 Q D -0.4134
40 A D -1.0768
41 P D -0.8315
42 G D -1.4474
43 K D -2.0613
44 G D -0.9186
45 L D 0.5934
46 E D -0.0608
47 W D 0.4276
48 V D 0.0000
49 A D 0.0000
50 Y D 0.0000
51 I D 0.0000
52 S D 0.0000
53 P D 0.7294
54 Y D 1.3527
55 Y D 1.1698
56 G D 0.1135
57 S D 0.1537
58 T D 0.0047
59 S D -0.3617
60 Y D -0.8425
61 A D -1.3523
62 D D -2.4965
63 S D -1.6892
64 V D 0.0000
65 K D -2.6201
66 G D -1.7691
67 R D -1.2571
68 F D 0.0000
69 T D -0.7083
70 I D 0.0000
71 S D -0.2248
72 A D -0.4570
73 D D -1.0132
74 T D -0.8491
75 S D -1.3068
76 K D -2.1908
77 N D -1.4102
78 T D 0.0000
79 A D 0.0000
80 Y D -0.3275
81 L D 0.0000
82 Q D -0.8856
83 M D 0.0000
84 N D -1.4003
85 S D -1.3134
86 L D 0.0000
87 R D -2.2231
88 A D -1.6756
89 E D -2.1936
90 D D 0.0000
91 T D -0.6236
92 A D 0.0000
93 V D 0.6010
94 Y D 0.0000
95 Y D 0.5460
96 C D 0.0000
97 A D 0.0000
98 R D 0.0000
99 S D 0.0000
100 R D -0.1972 mutated: YR100D
101 Y D 0.0000
102 S D -0.1290
103 S D 0.2093
104 W D 1.0139
105 P D 0.3893
106 Y D 0.8146
107 A D 0.2797 mutated: GA107D
108 W D 0.6069
109 V D -0.1490
110 G D 0.0000
111 H D -0.8398
112 Y D -0.6259
113 R D -1.5297
114 A D -0.5604
115 L D -0.0385
116 D D -0.0582
117 Y D 0.5917
118 W D 0.4943
119 G D -0.0725
120 Q D -0.9079
121 G D 0.0000
122 T D 0.0000
123 L D 0.9853
124 V D 0.0000
125 T D 0.0000
126 V D 0.0000
127 S D -0.7503
128 S D -0.6676
129 A D -0.4184
130 S D -0.4935
131 T D -0.6319
132 K D -1.1834
133 G D -1.3700
134 P D -0.5286
135 S D -0.0736
136 V D 0.0000
137 F D 1.1803
138 P D 0.0816
139 L D 0.4098
140 A D -0.8459
141 P D 0.0000
142 S D -1.1476
143 S D -1.2194
144 K D -1.8926
145 S D -1.0491
146 T D -1.0537
147 S D -0.9315
148 G D -0.8847
149 G D -0.9134
150 T D -0.6655
151 A D 0.0000
152 A D -0.1673
153 L D 0.0000
154 G D 0.0000
155 C D 0.0000
156 L D 0.7065
157 V D 0.0000
158 K D -0.1222
159 D D -0.3655
160 Y D 0.0000
161 F D 0.0000
162 P D 0.0000
163 E D -0.8440
164 P D -0.8913
165 V D -0.5680
166 T D -0.5319
167 V D -0.2018
168 S D -0.3477
169 W D 0.0000
170 N D -0.7645
171 S D -0.6197
172 G D -0.4222
173 A D -0.2179
174 L D 0.0387
175 T D -0.2480
176 S D -0.3279
177 G D -0.4087
178 V D 0.0158
179 H D -0.5554
180 T D 0.0138
181 F D 0.7237
182 P D 0.4267
183 A D 1.0571
184 V D 2.3229
185 L D 1.9026
186 Q D 0.6628
187 S D 0.0500
188 S D -0.1890
189 G D 0.2722
190 L D 0.2601
191 Y D 0.6815
192 S D 0.0000
193 L D 0.0000
194 S D 0.5650
195 S D 0.0000
196 V D 0.3563
197 V D 0.0000
198 T D -0.2352
199 V D 0.0000
200 P D -0.6076
201 S D -0.6857
202 S D -0.5927
203 S D -0.6452
204 L D -0.8426
205 G D -1.0381
206 T D -0.7430
207 Q D -1.3365
208 T D -1.1440
209 Y D 0.0000
210 I D -1.1092
211 C D 0.0000
212 N D -1.4237
213 V D 0.0000
214 N D -1.7555
215 H D 0.0000
216 K D -2.8088
217 P D -1.6754
218 S D -1.8272
219 N D -2.6029
220 T D -2.1847
221 K D -2.6305
222 V D -1.5967
223 D D -2.5486
224 K D -1.9078
225 K D -2.5012
226 V D 0.0000
227 E D -2.6767
228 P D -1.5036
229 K D -2.0069
230 S D -1.4685
231 C D -1.0387
232 D D -2.4967
233 K D -2.5680
234 T D -1.4790
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Laboratory of Theory of Biopolymers 2018