| Chain sequence(s) |
B: GLSPLEQVRKLLEEHNVPQRQIEHVVGMFRRYKAYVDHKMPQEIIDEQKKFFEMEFHIYVPNGYEKANELIKKVEE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:03)
[INFO] Main: Simulation completed successfully. (00:03:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -0.2985 | |
| 2 | L | B | -0.1196 | |
| 3 | S | B | -0.5244 | |
| 4 | P | B | -1.6213 | |
| 5 | L | B | -1.4079 | |
| 6 | E | B | -1.6468 | |
| 7 | Q | B | -1.5703 | |
| 8 | V | B | 0.0000 | |
| 9 | R | B | -2.5588 | |
| 10 | K | B | -2.6322 | |
| 11 | L | B | -2.0272 | |
| 12 | L | B | 0.0000 | |
| 13 | E | B | -3.9845 | |
| 14 | E | B | -3.5479 | |
| 15 | H | B | -2.6123 | |
| 16 | N | B | -2.7977 | |
| 17 | V | B | 0.0000 | |
| 18 | P | B | -2.2757 | |
| 19 | Q | B | -3.3824 | |
| 20 | R | B | -3.3773 | |
| 21 | Q | B | -2.6774 | |
| 22 | I | B | 0.0000 | |
| 23 | E | B | -3.3156 | |
| 24 | H | B | -2.6824 | |
| 25 | V | B | 0.0000 | |
| 26 | V | B | 0.0000 | |
| 27 | G | B | -1.9698 | |
| 28 | M | B | -1.3377 | |
| 29 | F | B | 0.0000 | |
| 30 | R | B | -2.5426 | |
| 31 | R | B | -1.8976 | |
| 32 | Y | B | 0.0000 | |
| 33 | K | B | -2.4594 | |
| 34 | A | B | -1.7992 | |
| 35 | Y | B | -1.5935 | |
| 36 | V | B | -2.3739 | |
| 37 | D | B | -2.9401 | |
| 38 | H | B | -2.5406 | |
| 39 | K | B | -2.6963 | |
| 40 | M | B | -1.3567 | |
| 41 | P | B | -1.4851 | |
| 42 | Q | B | -2.5917 | |
| 43 | E | B | -2.8891 | |
| 44 | I | B | -1.4400 | |
| 45 | I | B | 0.0000 | |
| 46 | D | B | -3.0483 | |
| 47 | E | B | -3.1166 | |
| 48 | Q | B | -1.9840 | |
| 49 | K | B | -2.2502 | |
| 50 | K | B | -1.9571 | |
| 51 | F | B | -0.4746 | |
| 52 | F | B | 0.0000 | |
| 53 | E | B | 0.0000 | |
| 54 | M | B | 0.7066 | |
| 55 | E | B | 0.5810 | |
| 56 | F | B | 0.0000 | |
| 57 | H | B | 0.0829 | |
| 58 | I | B | 1.7286 | |
| 59 | Y | B | 0.5902 | |
| 60 | V | B | 0.0000 | |
| 61 | P | B | -0.8074 | |
| 62 | N | B | -1.6362 | |
| 63 | G | B | 0.0000 | |
| 64 | Y | B | -1.1623 | |
| 65 | E | B | -2.8204 | |
| 66 | K | B | -2.2174 | |
| 67 | A | B | 0.0000 | |
| 68 | N | B | -3.0213 | |
| 69 | E | B | -3.4753 | |
| 70 | L | B | 0.0000 | |
| 71 | I | B | 0.0000 | |
| 72 | K | B | -4.0380 | |
| 73 | K | B | -3.6767 | |
| 74 | V | B | -3.1603 | |
| 75 | E | B | -3.8054 | |
| 76 | E | B | -3.4862 |