| Chain sequence(s) |
L: PLDDEEAFEKQVTS
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 203 | P | L | 0.0294 | |
| 204 | L | L | 1.1719 | |
| 205 | D | L | -1.8352 | |
| 206 | D | L | -2.4543 | |
| 207 | E | L | -2.4834 | |
| 208 | E | L | -2.1490 | |
| 209 | A | L | 0.0526 | |
| 210 | F | L | 1.6124 | |
| 211 | E | L | -1.7767 | |
| 212 | K | L | -2.2551 | |
| 213 | Q | L | -1.1862 | |
| 214 | V | L | 1.5409 | |
| 215 | T | L | 0.2116 | |
| 216 | S | L | -0.2259 |