| Chain sequence(s) |
A: MSHHHHHHSGMEPVSEEKLKKVREILEKLYKETSKILKEAIEKMNYLEEHGKYMWNYIHEGNNRIGKEALKKLGELFKKSFLEILKTLGGISEENMKKAEELIEKTKEELEKAEVWSSEELAINFVKVLIKFAIELLKILEKEEPSVVEALKPLLKEFIEKLIKEFNIEKYIKERDVREIAFIAIDSLPEELKNSPLYEEFVNLVITSNLSVEELLEKLKELAKKNPEAEPILKTFEEVIELNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:16:09)
[INFO] Main: Simulation completed successfully. (00:16:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5559 | |
| 2 | S | A | -0.6141 | |
| 3 | H | A | -1.7308 | |
| 4 | H | A | -2.3124 | |
| 5 | H | A | -2.7368 | |
| 6 | H | A | -2.6991 | |
| 7 | H | A | -2.5712 | |
| 8 | H | A | -2.3412 | |
| 9 | S | A | -1.7553 | |
| 10 | G | A | -1.4546 | |
| 11 | M | A | -0.7356 | |
| 12 | E | A | -1.8238 | |
| 13 | P | A | -1.3285 | |
| 14 | V | A | -1.3523 | |
| 15 | S | A | -2.1606 | |
| 16 | E | A | -3.5201 | |
| 17 | E | A | -4.0139 | |
| 18 | K | A | -3.5811 | |
| 19 | L | A | -2.9172 | |
| 20 | K | A | -4.2652 | |
| 21 | K | A | -4.3243 | |
| 22 | V | A | 0.0000 | |
| 23 | R | A | -3.2952 | |
| 24 | E | A | -3.7151 | |
| 25 | I | A | -2.6458 | |
| 26 | L | A | 0.0000 | |
| 27 | E | A | -3.8495 | |
| 28 | K | A | -3.7313 | |
| 29 | L | A | 0.0000 | |
| 30 | Y | A | -2.6122 | |
| 31 | K | A | -3.5447 | |
| 32 | E | A | -3.1474 | |
| 33 | T | A | 0.0000 | |
| 34 | S | A | -2.5485 | |
| 35 | K | A | -3.0862 | |
| 36 | I | A | -2.2918 | |
| 37 | L | A | 0.0000 | |
| 38 | K | A | -3.1139 | |
| 39 | E | A | -3.5202 | |
| 40 | A | A | 0.0000 | |
| 41 | I | A | -2.4220 | |
| 42 | E | A | -3.2224 | |
| 43 | K | A | -2.7565 | |
| 44 | M | A | 0.0000 | |
| 45 | N | A | -2.0699 | |
| 46 | Y | A | -1.1220 | |
| 47 | L | A | -1.1152 | |
| 48 | E | A | -1.7823 | |
| 49 | E | A | -2.7013 | |
| 50 | H | A | -1.9175 | |
| 51 | G | A | 0.0000 | |
| 52 | K | A | -1.3844 | |
| 53 | Y | A | 0.5631 | |
| 54 | M | A | 0.8286 | |
| 55 | W | A | 0.7967 | |
| 56 | N | A | -0.2969 | |
| 57 | Y | A | 0.4438 | |
| 58 | I | A | 0.0000 | |
| 59 | H | A | -0.8386 | |
| 60 | E | A | -1.4892 | |
| 61 | G | A | -1.3046 | |
| 62 | N | A | 0.0000 | |
| 63 | N | A | -2.4268 | |
| 64 | R | A | -3.2422 | |
| 65 | I | A | -2.3249 | |
| 66 | G | A | 0.0000 | |
| 67 | K | A | -3.8589 | |
| 68 | E | A | -3.4063 | |
| 69 | A | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | K | A | -3.3503 | |
| 72 | K | A | -2.6849 | |
| 73 | L | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | E | A | -3.0313 | |
| 76 | L | A | -1.8622 | |
| 77 | F | A | 0.0000 | |
| 78 | K | A | -2.7498 | |
| 79 | K | A | -2.7038 | |
| 80 | S | A | 0.0000 | |
| 81 | F | A | 0.0000 | |
| 82 | L | A | -2.0656 | |
| 83 | E | A | -2.9581 | |
| 84 | I | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.4236 | |
| 87 | T | A | -2.0135 | |
| 88 | L | A | 0.0000 | |
| 89 | G | A | -1.1438 | |
| 90 | G | A | -1.4064 | |
| 91 | I | A | -1.5223 | |
| 92 | S | A | -2.2549 | |
| 93 | E | A | -3.3001 | |
| 94 | E | A | -3.6101 | |
| 95 | N | A | 0.0000 | |
| 96 | M | A | -3.0191 | |
| 97 | K | A | -4.1634 | |
| 98 | K | A | -3.8567 | |
| 99 | A | A | 0.0000 | |
| 100 | E | A | -3.7408 | |
| 101 | E | A | -4.1606 | |
| 102 | L | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | E | A | -4.1221 | |
| 105 | K | A | -3.9583 | |
| 106 | T | A | 0.0000 | |
| 107 | K | A | -3.5934 | |
| 108 | E | A | -3.8788 | |
| 109 | E | A | -3.3518 | |
| 110 | L | A | 0.0000 | |
| 111 | E | A | -3.8137 | |
| 112 | K | A | -3.4371 | |
| 113 | A | A | -2.7057 | |
| 114 | E | A | -2.9384 | |
| 115 | V | A | 0.0000 | |
| 116 | W | A | -0.8718 | |
| 117 | S | A | -0.9293 | |
| 118 | S | A | -1.6156 | |
| 119 | E | A | -1.9191 | |
| 120 | E | A | -1.3061 | |
| 121 | L | A | 0.0000 | |
| 122 | A | A | 0.0000 | |
| 123 | I | A | -0.7213 | |
| 124 | N | A | -0.9389 | |
| 125 | F | A | 0.0000 | |
| 126 | V | A | 0.0000 | |
| 127 | K | A | -0.4873 | |
| 128 | V | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | I | A | 0.0000 | |
| 131 | K | A | -0.8124 | |
| 132 | F | A | 0.0000 | |
| 133 | A | A | 0.0000 | |
| 134 | I | A | -0.8933 | |
| 135 | E | A | -1.3351 | |
| 136 | L | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | K | A | -2.0438 | |
| 139 | I | A | -1.9288 | |
| 140 | L | A | 0.0000 | |
| 141 | E | A | -3.7339 | |
| 142 | K | A | -3.6132 | |
| 143 | E | A | -3.1319 | |
| 144 | E | A | 0.0000 | |
| 145 | P | A | -2.2132 | |
| 146 | S | A | -1.4192 | |
| 147 | V | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | E | A | -2.3231 | |
| 150 | A | A | -1.3243 | |
| 151 | L | A | 0.0000 | |
| 152 | K | A | -1.4662 | |
| 153 | P | A | -1.2162 | |
| 154 | L | A | 0.0000 | |
| 155 | L | A | 0.0000 | |
| 156 | K | A | -1.3686 | |
| 157 | E | A | -1.5574 | |
| 158 | F | A | 0.0000 | |
| 159 | I | A | 0.0000 | |
| 160 | E | A | -2.9300 | |
| 161 | K | A | -2.6882 | |
| 162 | L | A | 0.0000 | |
| 163 | I | A | 0.0000 | |
| 164 | K | A | -3.5288 | |
| 165 | E | A | -3.3245 | |
| 166 | F | A | -2.4035 | |
| 167 | N | A | -3.2437 | |
| 168 | I | A | 0.0000 | |
| 169 | E | A | -3.8715 | |
| 170 | K | A | -2.8615 | |
| 171 | Y | A | -1.7934 | |
| 172 | I | A | 0.0000 | |
| 173 | K | A | -3.5723 | |
| 174 | E | A | -3.1997 | |
| 175 | R | A | -3.0519 | |
| 176 | D | A | -2.5647 | |
| 177 | V | A | -1.9474 | |
| 178 | R | A | -1.6629 | |
| 179 | E | A | -1.8238 | |
| 180 | I | A | 0.0000 | |
| 181 | A | A | 0.0000 | |
| 182 | F | A | 0.3703 | |
| 183 | I | A | 0.0000 | |
| 184 | A | A | 0.0000 | |
| 185 | I | A | 0.0000 | |
| 186 | D | A | -1.4209 | |
| 187 | S | A | -1.0205 | |
| 188 | L | A | 0.0000 | |
| 189 | P | A | -2.0624 | |
| 190 | E | A | -3.3879 | |
| 191 | E | A | -3.2409 | |
| 192 | L | A | 0.0000 | |
| 193 | K | A | -2.8028 | |
| 194 | N | A | -2.7968 | |
| 195 | S | A | -2.3010 | |
| 196 | P | A | -1.7649 | |
| 197 | L | A | 0.0000 | |
| 198 | Y | A | -1.9370 | |
| 199 | E | A | -2.9527 | |
| 200 | E | A | -2.6830 | |
| 201 | F | A | 0.0000 | |
| 202 | V | A | -0.5261 | |
| 203 | N | A | -0.7375 | |
| 204 | L | A | -0.3233 | |
| 205 | V | A | 0.0000 | |
| 206 | I | A | 1.4495 | |
| 207 | T | A | 0.3756 | |
| 208 | S | A | -0.3962 | |
| 209 | N | A | -1.2294 | |
| 210 | L | A | -1.1870 | |
| 211 | S | A | -1.8114 | |
| 212 | V | A | -1.9605 | |
| 213 | E | A | -2.8953 | |
| 214 | E | A | -3.2529 | |
| 215 | L | A | 0.0000 | |
| 216 | L | A | -2.5838 | |
| 217 | E | A | -3.9371 | |
| 218 | K | A | -3.4898 | |
| 219 | L | A | 0.0000 | |
| 220 | K | A | -3.8691 | |
| 221 | E | A | -4.0737 | |
| 222 | L | A | -3.4514 | |
| 223 | A | A | -3.8263 | |
| 224 | K | A | -4.1393 | |
| 225 | K | A | -3.7957 | |
| 226 | N | A | -3.2821 | |
| 227 | P | A | -2.7139 | |
| 228 | E | A | -3.0118 | |
| 229 | A | A | 0.0000 | |
| 230 | E | A | -3.0597 | |
| 231 | P | A | -1.7918 | |
| 232 | I | A | 0.0000 | |
| 233 | L | A | -2.2481 | |
| 234 | K | A | -2.5071 | |
| 235 | T | A | -1.7317 | |
| 236 | F | A | 0.0000 | |
| 237 | E | A | -2.0012 | |
| 238 | E | A | -2.2712 | |
| 239 | V | A | 0.0000 | |
| 240 | I | A | -1.7746 | |
| 241 | E | A | -2.2901 | |
| 242 | L | A | -1.3752 | |
| 243 | N | A | 0.0000 | |
| 244 | S | A | -1.6889 |