Project name: query_structure

Status: done

Started: 2026-03-16 22:53:11
Settings
Chain sequence(s) A: YHPIETLVDIFQEYPDEIEYIFKPSAVPLMRGGSNDEGLEVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKRPKKD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:24)
Show buried residues

Minimal score value
-3.6979
Maximal score value
1.182
Average score
-1.1482
Total score value
-89.5566

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Y A 0.4003
2 H A -0.3635
3 P A -0.5492
4 I A 0.5257
5 E A -0.9573
6 T A -0.0568
7 L A 0.9426
8 V A 0.0000
9 D A -0.4039
10 I A 0.0000
11 F A 0.6487
12 Q A -1.0450
13 E A -1.1543
14 Y A -0.3782
15 P A -0.8044
16 D A -1.5907
17 E A -0.4220
18 I A 1.0239
19 E A -0.7238
20 Y A 0.0627
21 I A 1.1820
22 F A 0.0000
23 K A -1.4337
24 P A -1.3434
25 S A -0.3457
26 A A -0.1816
27 V A 0.0000
28 P A 0.0601
29 L A 0.0000
30 M A -0.8624
31 R A -1.7866
32 G A -1.5804
33 G A -1.2800
34 S A -1.9883
35 N A -2.4344
36 D A -3.2539
37 E A -3.0510
38 G A -1.6433
39 L A -0.6580
40 E A -1.6439
41 V A -1.5432
42 P A -1.8833
43 T A -2.3640
44 E A -2.7801
45 E A -3.1287
46 S A -1.7588
47 N A -1.4132
48 I A -0.4986
49 T A -0.8151
50 M A -1.0736
51 Q A -1.6459
52 I A 0.0000
53 M A -0.5574
54 R A -0.8731
55 I A -0.7490
56 K A -1.4206
57 P A -1.4797
58 H A -1.9804
59 Q A -2.2724
60 G A -2.0097
61 Q A -1.7053
62 H A -0.8020
63 I A 0.3612
64 G A -0.7921
65 E A -1.8737
66 M A 0.0000
67 S A -0.8838
68 F A 0.0000
69 L A -0.9218
70 Q A -1.5513
71 H A -2.4624
72 N A -2.4473
73 K A -2.8957
74 R A -3.2723
75 P A -2.5382
76 K A -3.6479
77 K A -3.6979
78 D A -3.0896
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Laboratory of Theory of Biopolymers 2018