| Chain sequence(s) |
A: YHPIETLVDIFQEYPDEIEYIFKPSAVPLMRGGSNDEGLEVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKRPKKD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:23)
[INFO] Main: Simulation completed successfully. (00:02:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 0.4003 | |
| 2 | H | A | -0.3635 | |
| 3 | P | A | -0.5492 | |
| 4 | I | A | 0.5257 | |
| 5 | E | A | -0.9573 | |
| 6 | T | A | -0.0568 | |
| 7 | L | A | 0.9426 | |
| 8 | V | A | 0.0000 | |
| 9 | D | A | -0.4039 | |
| 10 | I | A | 0.0000 | |
| 11 | F | A | 0.6487 | |
| 12 | Q | A | -1.0450 | |
| 13 | E | A | -1.1543 | |
| 14 | Y | A | -0.3782 | |
| 15 | P | A | -0.8044 | |
| 16 | D | A | -1.5907 | |
| 17 | E | A | -0.4220 | |
| 18 | I | A | 1.0239 | |
| 19 | E | A | -0.7238 | |
| 20 | Y | A | 0.0627 | |
| 21 | I | A | 1.1820 | |
| 22 | F | A | 0.0000 | |
| 23 | K | A | -1.4337 | |
| 24 | P | A | -1.3434 | |
| 25 | S | A | -0.3457 | |
| 26 | A | A | -0.1816 | |
| 27 | V | A | 0.0000 | |
| 28 | P | A | 0.0601 | |
| 29 | L | A | 0.0000 | |
| 30 | M | A | -0.8624 | |
| 31 | R | A | -1.7866 | |
| 32 | G | A | -1.5804 | |
| 33 | G | A | -1.2800 | |
| 34 | S | A | -1.9883 | |
| 35 | N | A | -2.4344 | |
| 36 | D | A | -3.2539 | |
| 37 | E | A | -3.0510 | |
| 38 | G | A | -1.6433 | |
| 39 | L | A | -0.6580 | |
| 40 | E | A | -1.6439 | |
| 41 | V | A | -1.5432 | |
| 42 | P | A | -1.8833 | |
| 43 | T | A | -2.3640 | |
| 44 | E | A | -2.7801 | |
| 45 | E | A | -3.1287 | |
| 46 | S | A | -1.7588 | |
| 47 | N | A | -1.4132 | |
| 48 | I | A | -0.4986 | |
| 49 | T | A | -0.8151 | |
| 50 | M | A | -1.0736 | |
| 51 | Q | A | -1.6459 | |
| 52 | I | A | 0.0000 | |
| 53 | M | A | -0.5574 | |
| 54 | R | A | -0.8731 | |
| 55 | I | A | -0.7490 | |
| 56 | K | A | -1.4206 | |
| 57 | P | A | -1.4797 | |
| 58 | H | A | -1.9804 | |
| 59 | Q | A | -2.2724 | |
| 60 | G | A | -2.0097 | |
| 61 | Q | A | -1.7053 | |
| 62 | H | A | -0.8020 | |
| 63 | I | A | 0.3612 | |
| 64 | G | A | -0.7921 | |
| 65 | E | A | -1.8737 | |
| 66 | M | A | 0.0000 | |
| 67 | S | A | -0.8838 | |
| 68 | F | A | 0.0000 | |
| 69 | L | A | -0.9218 | |
| 70 | Q | A | -1.5513 | |
| 71 | H | A | -2.4624 | |
| 72 | N | A | -2.4473 | |
| 73 | K | A | -2.8957 | |
| 74 | R | A | -3.2723 | |
| 75 | P | A | -2.5382 | |
| 76 | K | A | -3.6479 | |
| 77 | K | A | -3.6979 | |
| 78 | D | A | -3.0896 |