| Chain sequence(s) |
A: DNQNMGFQWSFTNMD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.9019 | |
| 2 | N | A | -2.9352 | |
| 3 | Q | A | -2.7046 | |
| 4 | N | A | -1.8028 | |
| 5 | M | A | 0.0173 | |
| 6 | G | A | 0.2310 | |
| 7 | F | A | 1.5252 | |
| 8 | Q | A | 0.4576 | |
| 9 | W | A | 1.3789 | |
| 10 | S | A | 1.0574 | |
| 11 | F | A | 1.7567 | |
| 12 | T | A | 0.3891 | |
| 13 | N | A | -0.8423 | |
| 14 | M | A | -0.2440 | |
| 15 | D | A | -1.6403 |