| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHEGADDRVPFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPQGHPLPSGPPPSPLFTPPPPGSPYAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAVNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9438 | |
| 2 | L | A | 1.9649 | |
| 3 | P | A | 0.6612 | |
| 4 | P | A | 0.3626 | |
| 5 | T | A | 0.1163 | |
| 6 | T | A | 0.1330 | |
| 7 | P | A | 0.1650 | |
| 8 | V | A | 1.2374 | |
| 9 | A | A | 0.0787 | |
| 10 | K | A | -1.0360 | |
| 11 | V | A | -0.1870 | |
| 12 | Q | A | -1.4180 | |
| 13 | S | A | -1.5587 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4168 | |
| 16 | E | A | -2.4375 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4611 | |
| 20 | P | A | 0.1282 | |
| 21 | T | A | 0.1786 | |
| 22 | S | A | -0.0980 | |
| 23 | L | A | 0.0864 | |
| 24 | F | A | -0.0390 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3105 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9138 | |
| 31 | R | A | -2.6969 | |
| 32 | L | A | -0.8128 | |
| 33 | L | A | 1.1547 | |
| 34 | T | A | 1.3700 | |
| 35 | V | A | 1.8324 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2699 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6925 | |
| 40 | E | A | -1.8036 | |
| 41 | D | A | -0.7409 | |
| 42 | I | A | 1.3628 | |
| 43 | V | A | 2.3149 | |
| 44 | V | A | 1.8488 | |
| 45 | N | A | -0.4544 | |
| 46 | G | A | -0.2930 | |
| 47 | K | A | -0.0204 | |
| 48 | V | A | 2.1399 | |
| 49 | V | A | 2.7795 | |
| 50 | V | A | 1.5674 | |
| 51 | P | A | 0.3505 | |
| 52 | K | A | -0.7239 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1442 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4040 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2466 | |
| 70 | K | A | -1.7955 | |
| 71 | F | A | -0.6448 | |
| 72 | A | A | -0.5813 | |
| 73 | L | A | -0.8715 | |
| 74 | P | A | -1.2076 | |
| 75 | Q | A | -2.5041 | |
| 76 | K | A | -3.1060 | |
| 77 | D | A | -2.9867 | |
| 78 | F | A | -1.6671 | |
| 79 | Y | A | -1.8862 | |
| 80 | D | A | -2.6853 | |
| 81 | P | A | -2.3660 | |
| 82 | E | A | -3.0517 | |
| 83 | K | A | -3.3918 | |
| 84 | E | A | -2.4577 | |
| 85 | R | A | -1.2950 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6698 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9687 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3695 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7038 | |
| 99 | G | A | -0.5373 | |
| 100 | P | A | -0.4056 | |
| 101 | L | A | 0.0394 | |
| 102 | G | A | -0.2288 | |
| 103 | K | A | -0.6641 | |
| 104 | G | A | -0.4538 | |
| 105 | T | A | -0.4469 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0773 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2417 | |
| 110 | L | A | 0.1531 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1700 | |
| 113 | K | A | -0.3891 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.9354 | |
| 116 | D | A | -1.2457 | |
| 117 | T | A | -0.8404 | |
| 118 | E | A | -1.7797 | |
| 119 | N | A | -1.9923 | |
| 120 | P | A | -1.3065 | |
| 121 | T | A | -0.6394 | |
| 122 | A | A | -0.2497 | |
| 123 | P | A | -0.0333 | |
| 124 | V | A | -0.1054 | |
| 125 | H | A | -1.1719 | |
| 126 | E | A | -2.3123 | |
| 127 | G | A | -2.0159 | |
| 128 | A | A | -1.5135 | |
| 129 | D | A | -2.4262 | |
| 130 | D | A | -2.0914 | |
| 131 | R | A | -1.2252 | |
| 132 | V | A | -0.0453 | |
| 133 | P | A | 0.0740 | |
| 134 | F | A | 0.0808 | |
| 135 | S | A | -0.1532 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6185 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2571 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5631 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2023 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1189 | |
| 157 | D | A | 0.2988 | |
| 158 | I | A | 0.8404 | |
| 159 | A | A | 0.1198 | |
| 160 | E | A | -1.4805 | |
| 161 | P | A | -0.2262 | |
| 162 | C | A | 0.1878 | |
| 163 | P | A | -0.1694 | |
| 164 | G | A | -0.0745 | |
| 165 | L | A | 0.5971 | |
| 166 | P | A | -0.1096 | |
| 167 | P | A | -0.3368 | |
| 168 | G | A | -0.4210 | |
| 169 | A | A | -0.0203 | |
| 170 | C | A | 0.7427 | |
| 171 | P | A | 0.5531 | |
| 172 | P | A | 0.8737 | |
| 173 | I | A | 2.0469 | |
| 174 | Q | A | 0.8515 | |
| 175 | L | A | 1.4572 | |
| 176 | V | A | 0.8453 | |
| 177 | N | A | -0.2955 | |
| 178 | S | A | 0.0286 | |
| 179 | V | A | 0.4292 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3756 | |
| 182 | D | A | 0.0842 | |
| 183 | G | A | -0.1598 | |
| 184 | D | A | -0.5389 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1057 | |
| 190 | F | A | 0.0683 | |
| 191 | G | A | -0.0990 | |
| 192 | N | A | -0.2630 | |
| 193 | M | A | -0.1283 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3796 | |
| 197 | E | A | -2.5927 | |
| 198 | L | A | -1.2091 | |
| 199 | Q | A | -2.5381 | |
| 200 | Q | A | -3.3196 | |
| 201 | D | A | -3.5797 | |
| 202 | R | A | -3.3383 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1666 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3635 | |
| 211 | S | A | -1.8882 | |
| 212 | T | A | -1.4337 | |
| 213 | R | A | -2.0905 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1578 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3359 | |
| 220 | L | A | 0.5984 | |
| 221 | K | A | -1.1191 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8170 | |
| 224 | N | A | -1.5773 | |
| 225 | E | A | -1.2346 | |
| 226 | A | A | -0.6083 | |
| 227 | Y | A | -0.3686 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6578 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0872 | |
| 234 | F | A | 0.2714 | |
| 235 | G | A | -0.8314 | |
| 236 | R | A | -2.6351 | |
| 237 | R | A | -2.9610 | |
| 238 | E | A | -2.1803 | |
| 239 | Q | A | -0.2414 | |
| 240 | V | A | 1.4063 | |
| 241 | Y | A | 1.1001 | |
| 242 | A | A | 0.2210 | |
| 243 | R | A | -0.9062 | |
| 244 | H | A | -0.9624 | |
| 245 | F | A | 0.0026 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6002 | |
| 249 | C | A | -1.2357 | |
| 250 | G | A | -1.0441 | |
| 251 | P | A | -1.0033 | |
| 252 | Q | A | -1.2286 | |
| 253 | G | A | -1.2303 | |
| 254 | H | A | -1.4423 | |
| 255 | P | A | -1.0313 | |
| 256 | L | A | 0.2317 | |
| 257 | P | A | -0.1564 | |
| 258 | S | A | -0.2646 | |
| 259 | G | A | -0.5174 | |
| 260 | P | A | -0.7056 | |
| 261 | P | A | -0.4825 | |
| 262 | P | A | -0.3132 | |
| 263 | S | A | 0.1205 | |
| 264 | P | A | 0.4395 | |
| 265 | L | A | 1.5949 | |
| 266 | F | A | 1.1340 | |
| 267 | T | A | 0.2275 | |
| 268 | P | A | 0.1533 | |
| 269 | P | A | 0.0850 | |
| 270 | P | A | -0.4733 | |
| 271 | P | A | -0.5469 | |
| 272 | G | A | -0.3911 | |
| 273 | S | A | 0.0442 | |
| 274 | P | A | 0.2849 | |
| 275 | Y | A | 1.1998 | |
| 276 | A | A | 0.9754 | |
| 277 | V | A | 1.8773 | |
| 278 | P | A | 1.0215 | |
| 279 | P | A | 0.0491 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4128 | |
| 282 | D | A | -0.9270 | |
| 283 | Y | A | 0.7980 | |
| 284 | F | A | 0.6443 | |
| 285 | G | A | 0.2303 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9046 | |
| 291 | L | A | 1.6019 | |
| 292 | V | A | 0.6154 | |
| 293 | S | A | -0.1630 | |
| 294 | S | A | -0.9632 | |
| 295 | D | A | -1.8429 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1139 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6416 | |
| 301 | R | A | -1.8481 | |
| 302 | P | A | -0.9743 | |
| 303 | F | A | -0.1962 | |
| 304 | W | A | -0.5628 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0858 | |
| 307 | R | A | -2.8294 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3647 | |
| 310 | G | A | -1.2157 | |
| 311 | N | A | -1.2738 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8054 | |
| 319 | N | A | -0.8471 | |
| 320 | E | A | -1.0342 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3446 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0859 | |
| 333 | N | A | 0.5507 | |
| 334 | F | A | 1.7386 | |
| 335 | T | A | 0.7402 | |
| 336 | I | A | 0.3917 | |
| 337 | S | A | -1.0324 | |
| 338 | Q | A | -1.8027 | |
| 339 | Q | A | -1.3484 | |
| 340 | L | A | 0.4326 | |
| 341 | S | A | 0.2215 | |
| 342 | T | A | -0.0006 | |
| 343 | P | A | -0.2542 | |
| 344 | A | A | 0.2028 | |
| 345 | V | A | 0.6911 | |
| 346 | N | A | 0.0561 | |
| 347 | V | A | 1.7380 | |
| 348 | Y | A | 1.5292 | |
| 349 | D | A | -0.0946 | |
| 350 | P | A | -0.7197 | |
| 351 | S | A | -0.5558 | |
| 352 | N | A | -0.2463 | |
| 353 | F | A | -1.0003 | |
| 354 | K | A | -2.0028 | |
| 355 | N | A | -1.8331 | |
| 356 | Y | A | -0.1505 | |
| 357 | L | A | 0.6339 | |
| 358 | R | A | 0.9653 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3867 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0875 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0785 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6981 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2734 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3031 | |
| 376 | L | A | -1.6984 | |
| 377 | D | A | -1.9707 | |
| 378 | P | A | -1.0288 | |
| 379 | G | A | -1.0088 | |
| 380 | V | A | -0.9269 | |
| 381 | L | A | -0.5256 | |
| 382 | A | A | -0.6504 | |
| 383 | H | A | -0.8047 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4026 | |
| 386 | T | A | -0.5508 | |
| 387 | M | A | -0.3011 | |
| 388 | N | A | -0.8609 | |
| 389 | P | A | -1.2408 | |
| 390 | T | A | -1.4352 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4369 | |
| 393 | E | A | -2.7716 | |
| 394 | N | A | -2.3505 | |
| 395 | W | A | -1.3781 | |
| 396 | N | A | -1.1255 | |
| 397 | L | A | -0.1725 | |
| 398 | G | A | 0.5113 | |
| 399 | F | A | 2.4108 | |
| 400 | V | A | 1.8245 | |
| 401 | P | A | 0.0417 | |
| 402 | P | A | -1.8512 | |
| 403 | K | A | -3.3083 | |
| 404 | E | A | -3.7521 | |
| 405 | R | A | -3.8574 | |
| 406 | E | A | -3.7610 | |
| 407 | D | A | -2.8455 | |
| 408 | P | A | -1.7528 | |
| 409 | Y | A | -0.9820 | |
| 410 | K | A | -2.1155 | |
| 411 | G | A | -0.6305 | |
| 412 | L | A | 0.6744 | |
| 413 | I | A | 1.5909 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3741 | |
| 416 | E | A | -1.6563 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9524 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0737 | |
| 421 | E | A | -2.8134 | |
| 422 | R | A | -2.6987 | |
| 423 | F | A | -1.3149 | |
| 424 | S | A | -1.4932 | |
| 425 | Q | A | -1.8749 | |
| 426 | D | A | -2.9058 | |
| 427 | L | A | -1.9921 | |
| 428 | D | A | -2.7806 | |
| 429 | Q | A | -2.6219 | |
| 430 | F | A | -1.4281 | |
| 431 | A | A | -0.8964 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5666 | |
| 435 | K | A | -0.7036 | |
| 436 | F | A | 0.1449 | |
| 437 | L | A | 1.0313 | |
| 438 | Y | A | 0.8293 | |
| 439 | Q | A | -0.2716 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine