| Chain sequence(s) |
H: EGQLLESGGALVQPGGSLRLSCAASGFTFTSYAMSWVRQAPGKGLQWVAGINGGGDTTHYADSVKGRFTISRDNSKNTLSLQWNSLRAEDTAMYYCAKPAPLEYGDTSSYYYYGMDVWGQGTTVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:18)
[INFO] Main: Simulation completed successfully. (00:03:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2909 | |
| 2 | G | H | -1.6205 | |
| 3 | Q | H | -1.4706 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.9626 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4933 | |
| 8 | G | H | -0.9306 | |
| 9 | G | H | -0.3540 | |
| 10 | A | H | 0.4240 | |
| 11 | L | H | 1.1732 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.4979 | |
| 14 | P | H | -1.8681 | |
| 15 | G | H | -1.6455 | |
| 16 | G | H | -1.1977 | |
| 17 | S | H | -1.6242 | |
| 18 | L | H | -1.0889 | |
| 19 | R | H | -2.3004 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.5511 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2565 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.1799 | |
| 26 | G | H | -1.3967 | |
| 27 | F | H | -0.6073 | |
| 28 | T | H | -0.2783 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | -0.8403 | |
| 31 | S | H | -0.4939 | |
| 32 | Y | H | -0.4378 | |
| 33 | A | H | -0.4531 | |
| 34 | M | H | 0.0000 | |
| 35 | S | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | -0.5242 | |
| 39 | Q | H | -1.0980 | |
| 40 | A | H | -1.4440 | |
| 41 | P | H | -1.1977 | |
| 42 | G | H | -1.5232 | |
| 43 | K | H | -2.3345 | |
| 44 | G | H | -1.3680 | |
| 45 | L | H | -0.3275 | |
| 46 | Q | H | -0.6721 | |
| 47 | W | H | 0.1946 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | G | H | -0.5996 | |
| 51 | I | H | 0.0000 | |
| 52 | N | H | -2.1262 | |
| 53 | G | H | 0.0000 | |
| 54 | G | H | -1.7376 | |
| 55 | G | H | -1.9858 | |
| 56 | D | H | -2.4118 | |
| 57 | T | H | -1.7117 | |
| 58 | T | H | -1.2304 | |
| 59 | H | H | -1.4459 | |
| 60 | Y | H | -1.1694 | |
| 61 | A | H | -1.4594 | |
| 62 | D | H | -2.6454 | |
| 63 | S | H | -1.7967 | |
| 64 | V | H | 0.0000 | |
| 65 | K | H | -2.8368 | |
| 66 | G | H | -1.9883 | |
| 67 | R | H | -2.0269 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -1.1761 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.9159 | |
| 72 | R | H | -1.5661 | |
| 73 | D | H | -1.7758 | |
| 74 | N | H | -1.9403 | |
| 75 | S | H | -1.7077 | |
| 76 | K | H | -2.5147 | |
| 77 | N | H | -1.9835 | |
| 78 | T | H | -1.1798 | |
| 79 | L | H | 0.0000 | |
| 80 | S | H | -0.8376 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.5466 | |
| 83 | W | H | 0.0000 | |
| 84 | N | H | -2.2646 | |
| 85 | S | H | -1.6956 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.8764 | |
| 88 | A | H | -1.9891 | |
| 89 | E | H | -2.4277 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.8470 | |
| 92 | A | H | 0.0000 | |
| 93 | M | H | -0.0856 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.1292 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | K | H | 0.0000 | |
| 99 | P | H | 0.0000 | |
| 100 | A | H | -0.2265 | |
| 101 | P | H | -0.5835 | |
| 102 | L | H | 0.4691 | |
| 103 | E | H | -1.3522 | |
| 104 | Y | H | -0.0708 | |
| 105 | G | H | -1.0026 | |
| 106 | D | H | -1.4265 | |
| 107 | T | H | -0.5575 | |
| 108 | S | H | 0.1747 | |
| 109 | S | H | 1.1775 | |
| 110 | Y | H | 2.7155 | |
| 111 | Y | H | 2.7687 | |
| 112 | Y | H | 3.3126 | |
| 113 | Y | H | 2.4655 | |
| 114 | G | H | 0.6454 | |
| 115 | M | H | -0.0633 | |
| 116 | D | H | -1.4031 | |
| 117 | V | H | -0.6087 | |
| 118 | W | H | -0.0960 | |
| 119 | G | H | -0.0830 | |
| 120 | Q | H | -0.8572 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.1740 | |
| 123 | T | H | -0.0445 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0763 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8449 | |
| 128 | S | H | -0.5287 |