Project name: LYSOZME_Unfolded

Status: done

Started: 2024-06-13 09:09:11
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Chain sequence(s) A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:03)
Show buried residues

Minimal score value
-3.4714
Maximal score value
0.4261
Average score
-1.1401
Total score value
-147.0791

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.4795
2 V A 0.2262
3 F A 0.0000
4 G A -0.9414
5 R A -1.1629
6 C A -1.0254
7 E A -1.2550
8 L A 0.0000
9 A A 0.0000
10 A A -1.0402
11 A A -1.2357
12 M A 0.0000
13 K A -1.9206
14 R A -2.3686
15 H A -1.9216
16 G A -1.8230
17 L A 0.0000
18 D A -2.2155
19 N A -2.2776
20 Y A -1.7212
21 R A -2.3772
22 G A -1.8199
23 Y A -1.2571
24 S A -1.3572
25 L A 0.0000
26 G A 0.0000
27 N A -0.8847
28 W A 0.0000
29 V A 0.0000
30 C A 0.0000
31 A A 0.0000
32 A A 0.0000
33 K A -1.0740
34 F A -0.4875
35 E A -0.4196
36 S A 0.0000
37 N A -1.3396
38 F A 0.0000
39 N A -1.0827
40 T A 0.0000
41 Q A -1.4270
42 A A -1.2124
43 T A -1.5675
44 N A -2.4458
45 R A -3.0546
46 N A -2.3925
47 T A -1.4958
48 D A -2.2916
49 G A -1.9747
50 S A 0.0000
51 T A 0.0000
52 D A -1.5787
53 Y A 0.0000
54 G A 0.0000
55 I A 0.0000
56 L A 0.0000
57 Q A 0.0000
58 I A 0.0000
59 N A -1.4823
60 S A 0.0000
61 R A -2.3575
62 W A -0.9307
63 W A -1.0672
64 C A 0.0000
65 N A -2.7265
66 D A -2.0631
67 G A -1.9922
68 R A -2.6528
69 T A -2.2946
70 P A -1.7030
71 G A -1.4268
72 S A -2.1515
73 R A -2.5739
74 N A -2.0314
75 L A -0.8143
76 C A -1.0665
77 N A -1.5740
78 I A -0.7743
79 P A -1.1018
80 C A 0.0000
81 S A -0.5893
82 A A -0.4380
83 L A 0.0000
84 L A -0.9804
85 S A -1.3475
86 S A -1.6095
87 D A -2.1244
88 I A 0.0000
89 T A -1.0177
90 A A -0.7316
91 S A 0.0000
92 V A 0.0000
93 N A -1.7031
94 C A 0.0000
95 A A 0.0000
96 K A -1.7857
97 K A -1.9131
98 I A 0.0000
99 V A 0.0000
100 S A -2.1483
101 D A -2.7161
102 G A -2.1699
103 N A -2.1988
104 G A -1.8973
105 M A 0.0000
106 N A -1.5097
107 A A -0.6607
108 W A 0.0000
109 V A 0.4261
110 A A -0.9730
111 W A 0.0000
112 R A -3.1225
113 N A -3.0301
114 R A -3.0622
115 C A 0.0000
116 K A -3.4714
117 G A -2.2815
118 T A -2.1419
119 D A -2.2898
120 V A -1.7666
121 Q A -1.6936
122 A A -1.3654
123 W A -0.9125
124 I A -1.0405
125 R A -2.2975
126 G A -1.4233
127 C A -1.2577
128 R A -1.4839
129 L A 0.1358
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Laboratory of Theory of Biopolymers 2018