Project name: 18_x11e6_x4e7_i14e7_i20e6

Status: done

Started: 2025-08-11 19:16:42
Settings
Chain sequence(s) A: GPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:19)
Show buried residues

Minimal score value
-3.7675
Maximal score value
3.3915
Average score
-0.3302
Total score value
-86.5076

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7060
2 P A -1.2434
3 G A -1.0847
4 P A -1.0485
5 G A -1.5147
6 A A -1.7946
7 E A -3.0591
8 K A -3.1683
9 L A -2.3978
10 R A -3.2419
11 H A -2.2299
12 L A -0.9147
13 N A -2.2093
14 E A -2.7090
15 K A -3.6069
16 R A -3.6794
17 R A -3.0099
18 F A -0.8355
19 H A -1.4179
20 N A -1.8807
21 G A -1.1622
22 P A -0.9368
23 G A -0.9905
24 P A -0.8337
25 G A -0.8596
26 L A -1.1756
27 D A -1.5731
28 K A -2.3302
29 K A -2.9339
30 Q A -3.0442
31 R A -2.9478
32 F A -2.3092
33 H A -2.0685
34 N A -1.7987
35 I A -2.0113
36 R A -3.2525
37 G A -3.0532
38 R A -3.1562
39 W A -1.8014
40 T A -1.5230
41 G A -1.3964
42 P A -1.1313
43 G A -1.0232
44 P A -0.8904
45 G A -0.9820
46 N A -0.9391
47 P A -0.7700
48 A A 0.0000
49 E A -1.6325
50 K A -2.2529
51 L A -1.7795
52 R A -1.7703
53 H A -1.4540
54 L A -1.0228
55 N A -1.2845
56 E A 0.0000
57 K A -2.4253
58 R A -2.5043
59 R A -2.4278
60 F A -0.9375
61 G A -0.8443
62 P A -0.7236
63 G A -1.0906
64 P A -1.6354
65 G A -1.9167
66 S A -1.9152
67 K A -2.7042
68 I A -2.2558
69 S A -1.9264
70 E A -1.9739
71 Y A -1.2487
72 R A -1.5862
73 H A -0.8724
74 Y A -0.7112
75 C A -0.5755
76 Y A -0.7112
77 S A -0.3156
78 L A 0.1574
79 Y A 0.6260
80 G A 0.1669
81 G A -0.5116
82 P A -0.8088
83 G A -0.8359
84 P A -0.0968
85 G A 0.5075
86 L A 1.2564
87 L A 0.7492
88 C A -0.1315
89 H A -0.9371
90 E A -1.2966
91 Q A -1.1758
92 L A -0.6247
93 S A -0.5466
94 D A -1.2332
95 S A -1.2463
96 E A -2.3009
97 E A -2.8809
98 E A -3.7675
99 N A -3.4188
100 D A -3.6021
101 G A -2.4812
102 P A -1.3527
103 G A -1.4489
104 P A -1.4127
105 G A -2.3977
106 Q A -2.7111
107 S A -2.3847
108 T A -1.7180
109 H A -1.5322
110 V A -0.0163
111 D A -0.4974
112 I A 0.7034
113 R A -1.1996
114 T A -1.0303
115 L A -0.7847
116 E A -2.2844
117 D A -1.4727
118 L A 0.5220
119 L A 1.6201
120 M A 1.3623
121 G A 0.2159
122 P A -0.5625
123 G A -0.8509
124 P A -0.8383
125 G A -0.8558
126 T A -0.4069
127 P A -0.1416
128 T A 0.0228
129 L A 0.6855
130 H A -0.7269
131 E A -0.8490
132 Y A 1.0891
133 M A 1.5552
134 L A 1.6089
135 D A -0.1756
136 L A 0.3333
137 Q A -1.3168
138 P A -1.5999
139 E A -2.1855
140 T A -1.4968
141 G A -1.2297
142 P A -0.8583
143 G A -0.7666
144 P A -0.6120
145 G A -0.5772
146 L A 0.4176
147 Q A -0.6903
148 D A -0.3269
149 I A 2.1957
150 V A 2.7188
151 L A 2.4776
152 H A 0.7391
153 L A 0.6083
154 E A -1.7511
155 P A -1.9678
156 Q A -2.3946
157 N A -2.6039
158 E A -1.8786
159 I A 0.4237
160 P A -0.0757
161 G A -0.5454
162 P A -0.6345
163 G A -0.7477
164 P A -0.6151
165 G A -0.4063
166 Y A 0.2599
167 R A -1.2273
168 A A -0.4153
169 H A -0.0980
170 Y A 1.1201
171 N A 0.4896
172 I A 2.4170
173 V A 2.4682
174 T A 2.0936
175 F A 3.3915
176 A A 2.2999
177 A A 1.8251
178 Y A 2.2733
179 T A 1.9889
180 L A 2.7977
181 Q A 1.2940
182 D A 1.4363
183 I A 3.2237
184 V A 3.2868
185 L A 2.8313
186 H A 1.8198
187 L A 3.1821
188 A A 2.8295
189 A A 2.6377
190 Y A 3.3486
191 L A 3.3868
192 L A 3.1221
193 M A 3.1628
194 G A 2.2674
195 T A 2.4841
196 L A 3.0649
197 G A 1.9273
198 I A 2.7455
199 V A 2.9527
200 A A 1.8504
201 A A 1.4599
202 Y A 1.4107
203 L A 1.0032
204 P A -0.3723
205 A A -0.8439
206 R A -1.6989
207 R A -2.3344
208 A A -1.6547
209 E A -1.9914
210 P A -1.3921
211 Q A -0.8097
212 A A -0.0880
213 A A 0.0000
214 Y A 1.6254
215 V A 2.7351
216 Y A 1.6998
217 D A 0.7081
218 F A 1.8436
219 A A 0.9998
220 F A 0.6647
221 R A -1.2882
222 D A -1.3876
223 L A 0.0665
224 A A -0.6766
225 A A -0.7397
226 Y A -0.0278
227 R A -1.1150
228 F A -0.1138
229 H A -0.7501
230 N A -0.8726
231 I A 0.6466
232 A A 0.3909
233 G A -0.4048
234 H A 0.1130
235 Y A 1.5619
236 A A 1.5521
237 A A 1.4180
238 Y A 2.3262
239 C A 2.3149
240 Y A 2.6062
241 S A 2.0044
242 L A 2.7189
243 Y A 2.3432
244 G A 1.0484
245 T A 1.0924
246 T A 1.0955
247 L A 1.5657
248 A A 0.8200
249 A A 1.3000
250 Y A 1.3832
251 K A -0.1952
252 T A 0.1123
253 V A 0.5183
254 L A 0.1230
255 E A -1.0748
256 L A 0.6180
257 T A 0.1231
258 E A -0.6300
259 V A 1.3932
260 A A 0.9064
261 A A 0.8124
262 Y A 1.5007
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Laboratory of Theory of Biopolymers 2018