Project name: EP093_agg

Status: done

Started: 2026-07-26 04:00:52
Settings
Chain sequence(s) A: CTVTVPKDLYVVEYGSNC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:03)
Show buried residues

Minimal score value
-1.5311
Maximal score value
2.9595
Average score
0.7939
Total score value
14.2904

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 1.1579
2 T A 0.0000
3 V A 1.7568
4 T A 0.6913
5 V A 1.0858
6 P A -0.1135
7 K A -1.4283
8 D A -1.5311
9 L A 1.0462
10 Y A 1.3456
11 V A 2.8671
12 V A 2.9595
13 E A 1.6333
14 Y A 1.9676
15 G A 0.4331
16 S A 0.0694
17 N A -0.2677
18 C A 0.6174
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Laboratory of Theory of Biopolymers 2018