| Chain sequence(s) |
A: CTVTVPKDLYVVEYGSNC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 1.1579 | |
| 2 | T | A | 0.0000 | |
| 3 | V | A | 1.7568 | |
| 4 | T | A | 0.6913 | |
| 5 | V | A | 1.0858 | |
| 6 | P | A | -0.1135 | |
| 7 | K | A | -1.4283 | |
| 8 | D | A | -1.5311 | |
| 9 | L | A | 1.0462 | |
| 10 | Y | A | 1.3456 | |
| 11 | V | A | 2.8671 | |
| 12 | V | A | 2.9595 | |
| 13 | E | A | 1.6333 | |
| 14 | Y | A | 1.9676 | |
| 15 | G | A | 0.4331 | |
| 16 | S | A | 0.0694 | |
| 17 | N | A | -0.2677 | |
| 18 | C | A | 0.6174 |