| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAGVYDELGHVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTSLWGYYTMWDPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5020 | |
| 2 | S | A | -0.1934 | |
| 3 | D | A | -1.2410 | |
| 4 | V | A | -0.8698 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.9506 | |
| 7 | D | A | -3.2836 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1381 | |
| 10 | V | A | 0.0377 | |
| 11 | V | A | 1.5018 | |
| 12 | A | A | 0.8657 | |
| 13 | A | A | 0.2790 | |
| 14 | T | A | -0.3565 | |
| 15 | P | A | -1.1403 | |
| 16 | T | A | -1.0049 | |
| 17 | S | A | -0.5477 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6993 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1178 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.9089 | |
| 24 | A | A | -1.2976 | |
| 25 | G | A | -0.6035 | |
| 26 | V | A | 0.7418 | |
| 27 | Y | A | -0.1941 | |
| 28 | D | A | -1.8973 | |
| 29 | E | A | -1.9562 | |
| 30 | L | A | -0.1276 | |
| 31 | G | A | 0.0000 | |
| 32 | H | A | -1.4600 | |
| 33 | V | A | 0.0000 | |
| 34 | R | A | -1.8604 | |
| 35 | Y | A | -1.0147 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.8222 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | -0.7109 | |
| 40 | Y | A | -0.4221 | |
| 41 | G | A | 0.0000 | |
| 42 | E | A | -1.5579 | |
| 43 | T | A | -1.2349 | |
| 44 | G | A | -1.2217 | |
| 45 | G | A | -1.3341 | |
| 46 | N | A | -1.5200 | |
| 47 | S | A | -0.8626 | |
| 48 | P | A | -0.4025 | |
| 49 | V | A | 0.2734 | |
| 50 | Q | A | -1.1937 | |
| 51 | E | A | -1.8647 | |
| 52 | F | A | -0.8334 | |
| 53 | T | A | -0.5389 | |
| 54 | V | A | 0.0000 | |
| 55 | P | A | -1.0992 | |
| 56 | G | A | 0.0000 | |
| 57 | S | A | -1.3590 | |
| 58 | K | A | -1.8219 | |
| 59 | S | A | -1.3139 | |
| 60 | T | A | -0.7202 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2238 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6655 | |
| 65 | G | A | -1.0349 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.3737 | |
| 68 | P | A | -1.6643 | |
| 69 | G | A | -1.4475 | |
| 70 | V | A | -1.4398 | |
| 71 | D | A | -2.0869 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.7721 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | -0.2751 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.2887 | |
| 78 | A | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | T | A | 0.0000 | |
| 81 | S | A | 0.8149 | |
| 82 | L | A | 1.7600 | |
| 83 | W | A | 1.9968 | |
| 84 | G | A | 1.1572 | |
| 85 | Y | A | 2.2035 | |
| 86 | Y | A | 2.0603 | |
| 87 | T | A | 1.4620 | |
| 88 | M | A | 0.8331 | |
| 89 | W | A | 0.8949 | |
| 90 | D | A | -0.3620 | |
| 91 | P | A | -0.0378 | |
| 92 | I | A | -0.1460 | |
| 93 | S | A | -0.3946 | |
| 94 | I | A | -0.6944 | |
| 95 | N | A | -1.7203 | |
| 96 | Y | A | -1.4941 | |
| 97 | R | A | -2.5429 | |
| 98 | T | A | -1.5255 |