Project name: query_structure

Status: done

Started: 2026-03-17 01:08:27
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAGVYDELGHVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTSLWGYYTMWDPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:48)
Show buried residues

Minimal score value
-3.2836
Maximal score value
2.2035
Average score
-0.511
Total score value
-50.0793

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.5020
2 S A -0.1934
3 D A -1.2410
4 V A -0.8698
5 P A 0.0000
6 R A -2.9506
7 D A -3.2836
8 L A 0.0000
9 E A -2.1381
10 V A 0.0377
11 V A 1.5018
12 A A 0.8657
13 A A 0.2790
14 T A -0.3565
15 P A -1.1403
16 T A -1.0049
17 S A -0.5477
18 L A 0.0000
19 L A 0.6993
20 I A 0.0000
21 S A -1.1178
22 W A 0.0000
23 D A -2.9089
24 A A -1.2976
25 G A -0.6035
26 V A 0.7418
27 Y A -0.1941
28 D A -1.8973
29 E A -1.9562
30 L A -0.1276
31 G A 0.0000
32 H A -1.4600
33 V A 0.0000
34 R A -1.8604
35 Y A -1.0147
36 Y A 0.0000
37 R A -0.8222
38 I A 0.0000
39 T A -0.7109
40 Y A -0.4221
41 G A 0.0000
42 E A -1.5579
43 T A -1.2349
44 G A -1.2217
45 G A -1.3341
46 N A -1.5200
47 S A -0.8626
48 P A -0.4025
49 V A 0.2734
50 Q A -1.1937
51 E A -1.8647
52 F A -0.8334
53 T A -0.5389
54 V A 0.0000
55 P A -1.0992
56 G A 0.0000
57 S A -1.3590
58 K A -1.8219
59 S A -1.3139
60 T A -0.7202
61 A A 0.0000
62 T A 0.2238
63 I A 0.0000
64 S A -0.6655
65 G A -1.0349
66 L A 0.0000
67 K A -2.3737
68 P A -1.6643
69 G A -1.4475
70 V A -1.4398
71 D A -2.0869
72 Y A 0.0000
73 T A -0.7721
74 I A 0.0000
75 T A -0.2751
76 V A 0.0000
77 Y A 0.2887
78 A A 0.0000
79 V A 0.0000
80 T A 0.0000
81 S A 0.8149
82 L A 1.7600
83 W A 1.9968
84 G A 1.1572
85 Y A 2.2035
86 Y A 2.0603
87 T A 1.4620
88 M A 0.8331
89 W A 0.8949
90 D A -0.3620
91 P A -0.0378
92 I A -0.1460
93 S A -0.3946
94 I A -0.6944
95 N A -1.7203
96 Y A -1.4941
97 R A -2.5429
98 T A -1.5255
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Laboratory of Theory of Biopolymers 2018