| Chain sequence(s) |
A: MSHHHHHHSGMDVFAEPKIPKVEVVFEGKENRYYREFFRLVYEIYYFSSNALEHLKAILKEFKPKVEAGKVTEEEKKKIKKIIAKIAKKLIELFDEVKKFYKEYGYELMYWDPIAYWYLGRLYRLSEKYKPILEEIYEKFKDPSKEISGEEILKEIEKLIKILEEYIKITSEFIEYYSKYYEITEVKETEDGTIVITIKRKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:11:15)
[INFO] Main: Simulation completed successfully. (00:11:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5374 | |
| 2 | S | A | -0.6319 | |
| 3 | H | A | -1.7538 | |
| 4 | H | A | -2.3450 | |
| 5 | H | A | -2.8012 | |
| 6 | H | A | -2.7462 | |
| 7 | H | A | -2.5377 | |
| 8 | H | A | -2.0679 | |
| 9 | S | A | -1.5207 | |
| 10 | G | A | -1.2365 | |
| 11 | M | A | -0.9119 | |
| 12 | D | A | -1.7482 | |
| 13 | V | A | -1.3051 | |
| 14 | F | A | -1.3790 | |
| 15 | A | A | -1.6448 | |
| 16 | E | A | -2.6879 | |
| 17 | P | A | 0.0000 | |
| 18 | K | A | -2.2712 | |
| 19 | I | A | -1.1399 | |
| 20 | P | A | 0.0000 | |
| 21 | K | A | -2.3063 | |
| 22 | V | A | 0.0000 | |
| 23 | E | A | -1.3166 | |
| 24 | V | A | 0.0000 | |
| 25 | V | A | -0.2838 | |
| 26 | F | A | -1.2543 | |
| 27 | E | A | -1.9128 | |
| 28 | G | A | -2.1930 | |
| 29 | K | A | -2.9363 | |
| 30 | E | A | -2.6204 | |
| 31 | N | A | -2.0326 | |
| 32 | R | A | -2.6023 | |
| 33 | Y | A | -1.3994 | |
| 34 | Y | A | 0.0000 | |
| 35 | R | A | -2.0578 | |
| 36 | E | A | -1.5509 | |
| 37 | F | A | 0.0000 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | -1.0703 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | 0.0000 | |
| 42 | Y | A | 0.0000 | |
| 43 | E | A | -0.5391 | |
| 44 | I | A | 0.0000 | |
| 45 | Y | A | -0.0318 | |
| 46 | Y | A | 0.0239 | |
| 47 | F | A | 0.0000 | |
| 48 | S | A | 0.0000 | |
| 49 | S | A | -0.9644 | |
| 50 | N | A | -1.6836 | |
| 51 | A | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | E | A | -2.3083 | |
| 54 | H | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | K | A | -2.1149 | |
| 57 | A | A | -1.7828 | |
| 58 | I | A | 0.0000 | |
| 59 | L | A | -2.1555 | |
| 60 | K | A | -2.9337 | |
| 61 | E | A | -2.9584 | |
| 62 | F | A | 0.0000 | |
| 63 | K | A | -2.6077 | |
| 64 | P | A | -2.4892 | |
| 65 | K | A | -2.6447 | |
| 66 | V | A | -2.4498 | |
| 67 | E | A | -2.8450 | |
| 68 | A | A | -1.8787 | |
| 69 | G | A | -2.1268 | |
| 70 | K | A | -2.4784 | |
| 71 | V | A | -1.9442 | |
| 72 | T | A | -2.1627 | |
| 73 | E | A | -3.5962 | |
| 74 | E | A | -3.2957 | |
| 75 | E | A | -2.1355 | |
| 76 | K | A | -2.5849 | |
| 77 | K | A | -3.2749 | |
| 78 | K | A | -2.4839 | |
| 79 | I | A | 0.0000 | |
| 80 | K | A | 0.0000 | |
| 81 | K | A | -2.3772 | |
| 82 | I | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | A | A | 0.0000 | |
| 85 | K | A | -1.7795 | |
| 86 | I | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | K | A | -2.1944 | |
| 89 | K | A | -1.4576 | |
| 90 | L | A | 0.0000 | |
| 91 | I | A | -1.8489 | |
| 92 | E | A | -2.5049 | |
| 93 | L | A | 0.0000 | |
| 94 | F | A | 0.0000 | |
| 95 | D | A | -2.6787 | |
| 96 | E | A | -2.5293 | |
| 97 | V | A | 0.0000 | |
| 98 | K | A | -3.0608 | |
| 99 | K | A | -3.4364 | |
| 100 | F | A | 0.0000 | |
| 101 | Y | A | -1.7799 | |
| 102 | K | A | -2.9727 | |
| 103 | E | A | -2.8580 | |
| 104 | Y | A | -1.3299 | |
| 105 | G | A | 0.0000 | |
| 106 | Y | A | 0.8979 | |
| 107 | E | A | 0.3391 | |
| 108 | L | A | 0.0000 | |
| 109 | M | A | 1.5652 | |
| 110 | Y | A | 1.8458 | |
| 111 | W | A | 1.4723 | |
| 112 | D | A | 0.7876 | |
| 113 | P | A | 0.8379 | |
| 114 | I | A | 1.1886 | |
| 115 | A | A | 0.0000 | |
| 116 | Y | A | 1.2915 | |
| 117 | W | A | 1.1742 | |
| 118 | Y | A | 0.0000 | |
| 119 | L | A | 0.0000 | |
| 120 | G | A | 0.0000 | |
| 121 | R | A | -0.7236 | |
| 122 | L | A | 0.0000 | |
| 123 | Y | A | -1.7731 | |
| 124 | R | A | -2.9156 | |
| 125 | L | A | -2.0444 | |
| 126 | S | A | 0.0000 | |
| 127 | E | A | -3.2769 | |
| 128 | K | A | -2.9939 | |
| 129 | Y | A | 0.0000 | |
| 130 | K | A | -2.1973 | |
| 131 | P | A | -1.7560 | |
| 132 | I | A | -1.6320 | |
| 133 | L | A | 0.0000 | |
| 134 | E | A | -2.8632 | |
| 135 | E | A | -3.2862 | |
| 136 | I | A | 0.0000 | |
| 137 | Y | A | -2.8451 | |
| 138 | E | A | -3.6919 | |
| 139 | K | A | -3.0384 | |
| 140 | F | A | 0.0000 | |
| 141 | K | A | -3.3668 | |
| 142 | D | A | -3.0633 | |
| 143 | P | A | -2.8041 | |
| 144 | S | A | -2.0382 | |
| 145 | K | A | -2.4406 | |
| 146 | E | A | -2.8217 | |
| 147 | I | A | 0.0000 | |
| 148 | S | A | -1.5937 | |
| 149 | G | A | 0.0000 | |
| 150 | E | A | -3.2114 | |
| 151 | E | A | -2.8208 | |
| 152 | I | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | K | A | -3.4594 | |
| 155 | E | A | -2.4772 | |
| 156 | I | A | 0.0000 | |
| 157 | E | A | -3.2973 | |
| 158 | K | A | -2.6070 | |
| 159 | L | A | 0.0000 | |
| 160 | I | A | -2.4680 | |
| 161 | K | A | -2.9217 | |
| 162 | I | A | 0.0000 | |
| 163 | L | A | 0.0000 | |
| 164 | E | A | -2.6176 | |
| 165 | E | A | -2.2639 | |
| 166 | Y | A | 0.0000 | |
| 167 | I | A | -1.3899 | |
| 168 | K | A | -2.2971 | |
| 169 | I | A | 0.0000 | |
| 170 | T | A | 0.0000 | |
| 171 | S | A | -1.0627 | |
| 172 | E | A | -1.3791 | |
| 173 | F | A | 0.0000 | |
| 174 | I | A | -0.8332 | |
| 175 | E | A | -1.9808 | |
| 176 | Y | A | -0.8601 | |
| 177 | Y | A | 0.0000 | |
| 178 | S | A | -1.8279 | |
| 179 | K | A | -2.2837 | |
| 180 | Y | A | -1.8123 | |
| 181 | Y | A | 0.0000 | |
| 182 | E | A | -2.8457 | |
| 183 | I | A | -0.7319 | |
| 184 | T | A | -1.1859 | |
| 185 | E | A | -1.4582 | |
| 186 | V | A | -0.4244 | |
| 187 | K | A | -2.2682 | |
| 188 | E | A | -3.0740 | |
| 189 | T | A | -2.7158 | |
| 190 | E | A | -3.2712 | |
| 191 | D | A | -3.2241 | |
| 192 | G | A | -2.7365 | |
| 193 | T | A | 0.0000 | |
| 194 | I | A | 0.0000 | |
| 195 | V | A | -1.1304 | |
| 196 | I | A | 0.0000 | |
| 197 | T | A | -0.6878 | |
| 198 | I | A | 0.0000 | |
| 199 | K | A | -3.3930 | |
| 200 | R | A | -3.9903 | |
| 201 | K | A | -3.1737 | |
| 202 | N | A | -2.4925 | |
| 203 | S | A | -1.1994 |