Project name: a76088d1d9417ab

Status: done

Started: 2026-06-27 11:26:35
Settings
Chain sequence(s) A: MSHHHHHHSGMDVFAEPKIPKVEVVFEGKENRYYREFFRLVYEIYYFSSNALEHLKAILKEFKPKVEAGKVTEEEKKKIKKIIAKIAKKLIELFDEVKKFYKEYGYELMYWDPIAYWYLGRLYRLSEKYKPILEEIYEKFKDPSKEISGEEILKEIEKLIKILEEYIKITSEFIEYYSKYYEITEVKETEDGTIVITIKRKNS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:11:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:11:17)
Show buried residues

Minimal score value
-3.9903
Maximal score value
1.8458
Average score
-1.343
Total score value
-272.6234

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5374
2 S A -0.6319
3 H A -1.7538
4 H A -2.3450
5 H A -2.8012
6 H A -2.7462
7 H A -2.5377
8 H A -2.0679
9 S A -1.5207
10 G A -1.2365
11 M A -0.9119
12 D A -1.7482
13 V A -1.3051
14 F A -1.3790
15 A A -1.6448
16 E A -2.6879
17 P A 0.0000
18 K A -2.2712
19 I A -1.1399
20 P A 0.0000
21 K A -2.3063
22 V A 0.0000
23 E A -1.3166
24 V A 0.0000
25 V A -0.2838
26 F A -1.2543
27 E A -1.9128
28 G A -2.1930
29 K A -2.9363
30 E A -2.6204
31 N A -2.0326
32 R A -2.6023
33 Y A -1.3994
34 Y A 0.0000
35 R A -2.0578
36 E A -1.5509
37 F A 0.0000
38 F A 0.0000
39 R A -1.0703
40 L A 0.0000
41 V A 0.0000
42 Y A 0.0000
43 E A -0.5391
44 I A 0.0000
45 Y A -0.0318
46 Y A 0.0239
47 F A 0.0000
48 S A 0.0000
49 S A -0.9644
50 N A -1.6836
51 A A 0.0000
52 L A 0.0000
53 E A -2.3083
54 H A 0.0000
55 L A 0.0000
56 K A -2.1149
57 A A -1.7828
58 I A 0.0000
59 L A -2.1555
60 K A -2.9337
61 E A -2.9584
62 F A 0.0000
63 K A -2.6077
64 P A -2.4892
65 K A -2.6447
66 V A -2.4498
67 E A -2.8450
68 A A -1.8787
69 G A -2.1268
70 K A -2.4784
71 V A -1.9442
72 T A -2.1627
73 E A -3.5962
74 E A -3.2957
75 E A -2.1355
76 K A -2.5849
77 K A -3.2749
78 K A -2.4839
79 I A 0.0000
80 K A 0.0000
81 K A -2.3772
82 I A 0.0000
83 I A 0.0000
84 A A 0.0000
85 K A -1.7795
86 I A 0.0000
87 A A 0.0000
88 K A -2.1944
89 K A -1.4576
90 L A 0.0000
91 I A -1.8489
92 E A -2.5049
93 L A 0.0000
94 F A 0.0000
95 D A -2.6787
96 E A -2.5293
97 V A 0.0000
98 K A -3.0608
99 K A -3.4364
100 F A 0.0000
101 Y A -1.7799
102 K A -2.9727
103 E A -2.8580
104 Y A -1.3299
105 G A 0.0000
106 Y A 0.8979
107 E A 0.3391
108 L A 0.0000
109 M A 1.5652
110 Y A 1.8458
111 W A 1.4723
112 D A 0.7876
113 P A 0.8379
114 I A 1.1886
115 A A 0.0000
116 Y A 1.2915
117 W A 1.1742
118 Y A 0.0000
119 L A 0.0000
120 G A 0.0000
121 R A -0.7236
122 L A 0.0000
123 Y A -1.7731
124 R A -2.9156
125 L A -2.0444
126 S A 0.0000
127 E A -3.2769
128 K A -2.9939
129 Y A 0.0000
130 K A -2.1973
131 P A -1.7560
132 I A -1.6320
133 L A 0.0000
134 E A -2.8632
135 E A -3.2862
136 I A 0.0000
137 Y A -2.8451
138 E A -3.6919
139 K A -3.0384
140 F A 0.0000
141 K A -3.3668
142 D A -3.0633
143 P A -2.8041
144 S A -2.0382
145 K A -2.4406
146 E A -2.8217
147 I A 0.0000
148 S A -1.5937
149 G A 0.0000
150 E A -3.2114
151 E A -2.8208
152 I A 0.0000
153 L A 0.0000
154 K A -3.4594
155 E A -2.4772
156 I A 0.0000
157 E A -3.2973
158 K A -2.6070
159 L A 0.0000
160 I A -2.4680
161 K A -2.9217
162 I A 0.0000
163 L A 0.0000
164 E A -2.6176
165 E A -2.2639
166 Y A 0.0000
167 I A -1.3899
168 K A -2.2971
169 I A 0.0000
170 T A 0.0000
171 S A -1.0627
172 E A -1.3791
173 F A 0.0000
174 I A -0.8332
175 E A -1.9808
176 Y A -0.8601
177 Y A 0.0000
178 S A -1.8279
179 K A -2.2837
180 Y A -1.8123
181 Y A 0.0000
182 E A -2.8457
183 I A -0.7319
184 T A -1.1859
185 E A -1.4582
186 V A -0.4244
187 K A -2.2682
188 E A -3.0740
189 T A -2.7158
190 E A -3.2712
191 D A -3.2241
192 G A -2.7365
193 T A 0.0000
194 I A 0.0000
195 V A -1.1304
196 I A 0.0000
197 T A -0.6878
198 I A 0.0000
199 K A -3.3930
200 R A -3.9903
201 K A -3.1737
202 N A -2.4925
203 S A -1.1994
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Laboratory of Theory of Biopolymers 2018