| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFDEYAIGWFRQAPGKEREGVSCLRVSDGRTYYPDSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCASGSYYGCTVDDYDFWGQGTQVTVSSGGGGSGGGGSC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9797 | |
| 2 | V | A | -1.1102 | |
| 3 | Q | A | -0.8853 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2696 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.4860 | |
| 8 | G | A | -1.1552 | |
| 9 | G | A | -0.8324 | |
| 10 | G | A | -0.1183 | |
| 11 | L | A | 0.8650 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4997 | |
| 14 | P | A | -1.6885 | |
| 15 | G | A | -1.4419 | |
| 16 | G | A | -1.0292 | |
| 17 | S | A | -1.3703 | |
| 18 | L | A | -1.0845 | |
| 19 | R | A | -2.1511 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3626 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0843 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.8847 | |
| 26 | G | A | -1.1148 | |
| 27 | F | A | -0.8726 | |
| 28 | T | A | -1.0984 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.9344 | |
| 31 | E | A | -2.4129 | |
| 32 | Y | A | -0.7077 | |
| 33 | A | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.8965 | |
| 40 | A | A | -1.8707 | |
| 41 | P | A | -1.3288 | |
| 42 | G | A | -1.8907 | |
| 43 | K | A | -3.2529 | |
| 44 | E | A | -3.3952 | |
| 45 | R | A | -2.3527 | |
| 46 | E | A | -2.0594 | |
| 47 | G | A | -0.5191 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | C | A | 0.0000 | |
| 51 | L | A | -0.4633 | |
| 52 | R | A | -0.8448 | |
| 53 | V | A | -1.0383 | |
| 54 | S | A | -1.2505 | |
| 55 | D | A | -1.8004 | |
| 56 | G | A | -1.9115 | |
| 57 | R | A | -2.1915 | |
| 58 | T | A | -0.8380 | |
| 59 | Y | A | -0.1943 | |
| 60 | Y | A | -0.6133 | |
| 61 | P | A | -1.4347 | |
| 62 | D | A | -2.5051 | |
| 63 | S | A | -1.7619 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5778 | |
| 66 | G | A | -1.7956 | |
| 67 | R | A | -1.5624 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.7808 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5575 | |
| 72 | R | A | -1.4983 | |
| 73 | D | A | -2.2065 | |
| 74 | N | A | -2.8695 | |
| 75 | S | A | -2.0063 | |
| 76 | K | A | -2.6937 | |
| 77 | N | A | -2.3739 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6261 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2637 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.5533 | |
| 85 | S | A | -1.2779 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.3669 | |
| 88 | A | A | -1.7481 | |
| 89 | E | A | -2.2517 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8804 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4290 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.1460 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | S | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | S | A | 0.1795 | |
| 101 | Y | A | 1.1379 | |
| 102 | Y | A | 1.5738 | |
| 103 | G | A | 0.7003 | |
| 104 | C | A | 0.3232 | |
| 105 | T | A | -0.3315 | |
| 106 | V | A | -0.8816 | |
| 107 | D | A | -1.7845 | |
| 108 | D | A | -0.6830 | |
| 109 | Y | A | 0.0000 | |
| 110 | D | A | -1.6077 | |
| 111 | F | A | -0.3533 | |
| 112 | W | A | 0.0308 | |
| 113 | G | A | 0.0775 | |
| 114 | Q | A | -0.7860 | |
| 115 | G | A | 0.0000 | |
| 116 | T | A | -0.6513 | |
| 117 | Q | A | -1.0052 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | -0.3576 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.9855 | |
| 122 | S | A | -1.1352 | |
| 123 | G | A | -1.0912 | |
| 124 | G | A | -1.1762 | |
| 125 | G | A | -1.2255 | |
| 126 | G | A | -1.2316 | |
| 127 | S | A | -1.0941 | |
| 128 | G | A | -1.2032 | |
| 129 | G | A | -1.2108 | |
| 130 | G | A | -1.0565 | |
| 131 | G | A | -0.7995 | |
| 132 | S | A | -0.2675 | |
| 133 | C | A | 0.4524 |