| Chain sequence(s) |
H: QVQLQESGPGLVKPSETLSLTCTVSGGSFSSHFWSWIRQPPGKGLEWIGYILYTGGTSFNPSLKSRVSMSVGTSKNQFSLKLSSVTAADTAVYYCARARSGITFTGIIVPGSFDIWGQGTMVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6310 | |
| 2 | V | H | -1.3039 | |
| 3 | Q | H | -1.9939 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.8128 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6878 | |
| 8 | G | H | -0.4522 | |
| 9 | P | H | -0.0066 | |
| 11 | G | H | 0.3599 | |
| 12 | L | H | 0.8860 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.9142 | |
| 15 | P | H | -1.3430 | |
| 16 | S | H | -1.2916 | |
| 17 | E | H | -1.7104 | |
| 18 | T | H | -1.2952 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.9155 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.6317 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.1503 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.4819 | |
| 27 | G | H | -1.3367 | |
| 28 | G | H | -1.0242 | |
| 29 | S | H | -0.5069 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.2293 | |
| 36 | S | H | -0.2947 | |
| 37 | H | H | -0.1049 | |
| 38 | F | H | 0.2472 | |
| 39 | W | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6934 | |
| 45 | P | H | -0.8207 | |
| 46 | P | H | -0.9347 | |
| 47 | G | H | -1.4280 | |
| 48 | K | H | -2.3808 | |
| 49 | G | H | -1.5840 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6683 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.2168 | |
| 56 | I | H | 0.0000 | |
| 57 | L | H | 0.4037 | |
| 58 | Y | H | 0.3976 | |
| 59 | T | H | 0.0216 | |
| 63 | G | H | -0.1792 | |
| 64 | G | H | -0.1890 | |
| 65 | T | H | -0.0743 | |
| 66 | S | H | -0.2844 | |
| 67 | F | H | -0.5332 | |
| 68 | N | H | -0.7996 | |
| 69 | P | H | -1.0385 | |
| 70 | S | H | -0.9200 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -2.0838 | |
| 74 | S | H | -1.3570 | |
| 75 | R | H | -1.4155 | |
| 76 | V | H | 0.0000 | |
| 77 | S | H | -1.1074 | |
| 78 | M | H | 0.0000 | |
| 79 | S | H | -0.3524 | |
| 80 | V | H | -0.1178 | |
| 81 | G | H | -0.7734 | |
| 82 | T | H | -0.8699 | |
| 83 | S | H | -1.1684 | |
| 84 | K | H | -2.0366 | |
| 85 | N | H | -1.3426 | |
| 86 | Q | H | -1.0745 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.5292 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.5658 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0460 | |
| 93 | S | H | -0.9970 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5774 | |
| 96 | A | H | -0.2669 | |
| 97 | A | H | 0.0548 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2299 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2820 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.4098 | |
| 107 | A | H | 0.0000 | |
| 108 | R | H | -0.2365 | |
| 109 | S | H | 0.5658 | |
| 110 | G | H | 0.8673 | |
| 111 | I | H | 2.1774 | |
| 111A | T | H | 2.0923 | |
| 111B | F | H | 2.6351 | |
| 111C | T | H | 1.9358 | |
| 112D | G | H | 1.7375 | |
| 112C | I | H | 2.7954 | |
| 112B | I | H | 2.5592 | |
| 112A | V | H | 0.0000 | |
| 112 | P | H | 0.7467 | |
| 113 | G | H | 0.0000 | |
| 114 | S | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.5395 | |
| 117 | I | H | -0.6263 | |
| 118 | W | H | -0.7259 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7961 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.2551 | |
| 123 | M | H | 0.5246 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2841 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5438 | |
| 128 | S | H | -0.7312 | |
| 1 | E | L | -1.6598 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6235 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.7998 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.9849 | |
| 8 | P | L | -0.6213 | |
| 9 | G | L | -1.0172 | |
| 10 | T | L | -0.9292 | |
| 11 | L | L | -0.7195 | |
| 12 | S | L | -0.9449 | |
| 13 | L | L | -1.0936 | |
| 14 | S | L | -1.7270 | |
| 15 | P | L | -1.9279 | |
| 16 | G | L | -1.9319 | |
| 17 | E | L | -2.5903 | |
| 18 | R | L | -3.0835 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.8276 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8888 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3048 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0209 | |
| 27 | Q | L | -1.7147 | |
| 28 | S | L | -1.3596 | |
| 29 | V | L | 0.0000 | |
| 30 | S | L | -0.6127 | |
| 36 | S | L | -0.4016 | |
| 37 | S | L | -0.4662 | |
| 38 | Y | L | -0.0527 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7189 | |
| 45 | K | L | -1.0049 | |
| 46 | P | L | -0.7316 | |
| 47 | G | L | -1.3642 | |
| 48 | Q | L | -1.9346 | |
| 49 | A | L | -1.2135 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.0099 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0030 | |
| 56 | G | L | -0.2284 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5786 | |
| 66 | S | L | -0.5571 | |
| 67 | R | L | -1.2453 | |
| 68 | A | L | -0.6700 | |
| 69 | T | L | -0.5476 | |
| 70 | G | L | -0.8382 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -1.2611 | |
| 74 | D | L | -2.3643 | |
| 75 | R | L | -2.0374 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9297 | |
| 78 | G | L | -0.5099 | |
| 79 | S | L | -0.6636 | |
| 80 | G | L | -1.0452 | |
| 83 | S | L | -1.0314 | |
| 84 | G | L | -1.1913 | |
| 85 | T | L | -1.6929 | |
| 86 | D | L | -2.0374 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7570 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.8555 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.4013 | |
| 93 | R | L | -3.4091 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.1582 | |
| 96 | P | L | -1.5632 | |
| 97 | E | L | -1.8065 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.0011 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.3612 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | G | L | -0.0873 | |
| 109 | S | L | -0.7954 | |
| 114 | S | L | -0.7469 | |
| 115 | P | L | 0.0000 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.2117 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.4055 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2788 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.2972 | |
| 126 | I | L | -1.3172 | |
| 127 | K | L | -1.9215 |