| Chain sequence(s) |
A: CDLSCPSNKVCVIENGKQTCKCSERFVLENGVCICANDYKMEDGINCIAKNKCKRKEYENICTNPNEMCAYNEETDIVKCECKEHYYRSSRGECILNDYCKDINCKENEECSIVNFKPECVCKENLKKNNKGECIYENSCLINEGNCPKDSKCIYREYKPHECVCNKQGHVAVNGKCVLEDKCVHNKKCSENSICVNVMNKEPICVCTYNYYKKDAEAAAKAEAAAKAESQVRQQFSKDIEKLLNEQVNKEMQSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRKS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:12:52)
[INFO] Main: Simulation completed successfully. (00:12:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.5632 | |
| 2 | D | A | -0.9293 | |
| 3 | L | A | 0.1595 | |
| 4 | S | A | -0.1137 | |
| 5 | C | A | 0.0587 | |
| 6 | P | A | -0.0991 | |
| 7 | S | A | -0.2099 | |
| 8 | N | A | -0.2899 | |
| 9 | K | A | 0.1261 | |
| 10 | V | A | 0.8830 | |
| 11 | C | A | 0.6574 | |
| 12 | V | A | 0.5593 | |
| 13 | I | A | 0.3553 | |
| 14 | E | A | -2.0371 | |
| 15 | N | A | -2.3430 | |
| 16 | G | A | -1.8857 | |
| 17 | K | A | -2.0839 | |
| 18 | Q | A | -0.9234 | |
| 19 | T | A | -0.4364 | |
| 20 | C | A | 0.1518 | |
| 21 | K | A | -0.2562 | |
| 22 | C | A | -0.0799 | |
| 23 | S | A | -0.9830 | |
| 24 | E | A | -2.4325 | |
| 25 | R | A | -2.3122 | |
| 26 | F | A | -0.6224 | |
| 27 | V | A | 0.5056 | |
| 28 | L | A | 1.2498 | |
| 29 | E | A | -0.7039 | |
| 30 | N | A | -1.2509 | |
| 31 | G | A | -0.2821 | |
| 32 | V | A | 1.2169 | |
| 33 | C | A | 0.0000 | |
| 34 | I | A | 0.9203 | |
| 35 | C | A | 0.0000 | |
| 36 | A | A | -1.2060 | |
| 37 | N | A | -2.0466 | |
| 38 | D | A | -2.3945 | |
| 39 | Y | A | -1.9633 | |
| 40 | K | A | -2.5147 | |
| 41 | M | A | -1.5286 | |
| 42 | E | A | -2.5577 | |
| 43 | D | A | -2.6212 | |
| 44 | G | A | -1.5494 | |
| 45 | I | A | -0.4888 | |
| 46 | N | A | -2.0580 | |
| 47 | C | A | -1.8630 | |
| 48 | I | A | -1.4958 | |
| 49 | A | A | -2.0868 | |
| 50 | K | A | -2.4440 | |
| 51 | N | A | -2.0965 | |
| 52 | K | A | -2.0550 | |
| 53 | C | A | -1.8178 | |
| 54 | K | A | -2.9822 | |
| 55 | R | A | -2.9388 | |
| 56 | K | A | -3.8116 | |
| 57 | E | A | -3.4054 | |
| 58 | Y | A | -2.4165 | |
| 59 | E | A | -3.4423 | |
| 60 | N | A | -1.9430 | |
| 61 | I | A | -0.1988 | |
| 62 | C | A | -0.3363 | |
| 63 | T | A | -0.1773 | |
| 64 | N | A | -0.7531 | |
| 65 | P | A | -0.7555 | |
| 66 | N | A | -1.0836 | |
| 67 | E | A | -1.2145 | |
| 68 | M | A | -0.6296 | |
| 69 | C | A | -0.6780 | |
| 70 | A | A | -0.7695 | |
| 71 | Y | A | -1.4016 | |
| 72 | N | A | -2.2840 | |
| 73 | E | A | -3.4385 | |
| 74 | E | A | -3.1490 | |
| 75 | T | A | -1.9100 | |
| 76 | D | A | -2.5172 | |
| 77 | I | A | -0.3151 | |
| 78 | V | A | -0.1793 | |
| 79 | K | A | -0.6995 | |
| 80 | C | A | -0.5718 | |
| 81 | E | A | -1.9750 | |
| 82 | C | A | -1.6473 | |
| 83 | K | A | -1.8558 | |
| 84 | E | A | -2.0786 | |
| 85 | H | A | -0.9536 | |
| 86 | Y | A | -0.8164 | |
| 87 | Y | A | -0.7134 | |
| 88 | R | A | -2.1549 | |
| 89 | S | A | -1.4169 | |
| 90 | S | A | -1.6353 | |
| 91 | R | A | -2.5790 | |
| 92 | G | A | -1.8125 | |
| 93 | E | A | -1.6673 | |
| 94 | C | A | 0.0000 | |
| 95 | I | A | 0.1720 | |
| 96 | L | A | -0.2283 | |
| 97 | N | A | -1.1297 | |
| 98 | D | A | -2.2226 | |
| 99 | Y | A | -1.4094 | |
| 100 | C | A | -1.7896 | |
| 101 | K | A | -2.9548 | |
| 102 | D | A | -2.5876 | |
| 103 | I | A | -1.3877 | |
| 104 | N | A | -2.3801 | |
| 105 | C | A | -2.1652 | |
| 106 | K | A | -3.0711 | |
| 107 | E | A | -3.1349 | |
| 108 | N | A | 0.0000 | |
| 109 | E | A | 0.0000 | |
| 110 | E | A | -2.4525 | |
| 111 | C | A | -1.2197 | |
| 112 | S | A | 0.1380 | |
| 113 | I | A | 0.6989 | |
| 114 | V | A | 0.6729 | |
| 115 | N | A | -0.4556 | |
| 116 | F | A | 0.2356 | |
| 117 | K | A | -1.0390 | |
| 118 | P | A | -0.8923 | |
| 119 | E | A | -0.8016 | |
| 120 | C | A | -0.8487 | |
| 121 | V | A | -0.8589 | |
| 122 | C | A | -2.3030 | |
| 123 | K | A | -3.1703 | |
| 124 | E | A | -3.1606 | |
| 125 | N | A | -2.8830 | |
| 126 | L | A | -2.7884 | |
| 127 | K | A | -3.1134 | |
| 128 | K | A | -3.2775 | |
| 129 | N | A | -2.9461 | |
| 130 | N | A | -2.8634 | |
| 131 | K | A | -2.9227 | |
| 132 | G | A | -2.3117 | |
| 133 | E | A | -2.3530 | |
| 134 | C | A | 0.0000 | |
| 135 | I | A | -2.0685 | |
| 136 | Y | A | -2.8265 | |
| 137 | E | A | -2.9055 | |
| 138 | N | A | -1.0171 | |
| 139 | S | A | -0.8520 | |
| 140 | C | A | -0.7445 | |
| 141 | L | A | 1.2806 | |
| 142 | I | A | 1.2626 | |
| 143 | N | A | -1.4013 | |
| 144 | E | A | -2.1072 | |
| 145 | G | A | 0.0000 | |
| 146 | N | A | -2.5919 | |
| 147 | C | A | -2.7680 | |
| 148 | P | A | -2.6492 | |
| 149 | K | A | -3.2397 | |
| 150 | D | A | -2.4012 | |
| 151 | S | A | -2.6911 | |
| 152 | K | A | -2.6254 | |
| 153 | C | A | -1.8437 | |
| 154 | I | A | -0.9146 | |
| 155 | Y | A | -1.7840 | |
| 156 | R | A | -3.0360 | |
| 157 | E | A | -2.2846 | |
| 158 | Y | A | -1.4588 | |
| 159 | K | A | -2.7074 | |
| 160 | P | A | -2.3966 | |
| 161 | H | A | -2.5067 | |
| 162 | E | A | -2.4070 | |
| 163 | C | A | -1.7655 | |
| 164 | V | A | -0.8689 | |
| 165 | C | A | -1.8465 | |
| 166 | N | A | -2.7053 | |
| 167 | K | A | -2.3310 | |
| 168 | Q | A | -2.2115 | |
| 169 | G | A | -1.6657 | |
| 170 | H | A | -1.2770 | |
| 171 | V | A | -0.5625 | |
| 172 | A | A | -0.8335 | |
| 173 | V | A | -0.6478 | |
| 174 | N | A | -1.5725 | |
| 175 | G | A | -1.9948 | |
| 176 | K | A | -2.2099 | |
| 177 | C | A | -1.2668 | |
| 178 | V | A | -0.1658 | |
| 179 | L | A | -0.4098 | |
| 180 | E | A | -1.0776 | |
| 181 | D | A | -1.0478 | |
| 182 | K | A | -1.8045 | |
| 183 | C | A | -0.7287 | |
| 184 | V | A | 0.3021 | |
| 185 | H | A | -1.2520 | |
| 186 | N | A | -1.8598 | |
| 187 | K | A | -2.7458 | |
| 188 | K | A | -2.5791 | |
| 189 | C | A | -1.0772 | |
| 190 | S | A | -1.5470 | |
| 191 | E | A | -2.4627 | |
| 192 | N | A | -1.1149 | |
| 193 | S | A | 0.1644 | |
| 194 | I | A | 0.7071 | |
| 195 | C | A | 0.5293 | |
| 196 | V | A | 1.2667 | |
| 197 | N | A | -0.2145 | |
| 198 | V | A | -0.1199 | |
| 199 | M | A | -0.1548 | |
| 200 | N | A | -1.7690 | |
| 201 | K | A | -2.3118 | |
| 202 | E | A | -2.2738 | |
| 203 | P | A | -0.8085 | |
| 204 | I | A | 0.9911 | |
| 205 | C | A | 1.3510 | |
| 206 | V | A | 2.0187 | |
| 207 | C | A | 1.3106 | |
| 208 | T | A | 0.9881 | |
| 209 | Y | A | 1.4691 | |
| 210 | N | A | -0.0909 | |
| 211 | Y | A | 0.8380 | |
| 212 | Y | A | 0.6015 | |
| 213 | K | A | -1.7596 | |
| 214 | K | A | -2.3382 | |
| 215 | D | A | -2.9803 | |
| 216 | A | A | -2.3441 | |
| 217 | E | A | -2.8643 | |
| 218 | A | A | -2.6823 | |
| 219 | A | A | -2.4484 | |
| 220 | A | A | -2.2817 | |
| 221 | K | A | -2.6095 | |
| 222 | A | A | -2.1869 | |
| 223 | E | A | -2.8251 | |
| 224 | A | A | -2.0490 | |
| 225 | A | A | -1.7592 | |
| 226 | A | A | -2.2038 | |
| 227 | K | A | -2.6009 | |
| 228 | A | A | -1.8404 | |
| 229 | E | A | -2.3805 | |
| 230 | S | A | -2.1003 | |
| 231 | Q | A | -1.8863 | |
| 232 | V | A | -0.8887 | |
| 233 | R | A | -2.8147 | |
| 234 | Q | A | -2.9768 | |
| 235 | Q | A | -2.4299 | |
| 236 | F | A | 0.0000 | |
| 237 | S | A | -2.5107 | |
| 238 | K | A | -3.3227 | |
| 239 | D | A | -3.0124 | |
| 240 | I | A | 0.0000 | |
| 241 | E | A | -2.6582 | |
| 242 | K | A | -3.1171 | |
| 243 | L | A | -1.8140 | |
| 244 | L | A | 0.0000 | |
| 245 | N | A | 0.0000 | |
| 246 | E | A | -1.6283 | |
| 247 | Q | A | 0.0000 | |
| 248 | V | A | 0.0000 | |
| 249 | N | A | -0.4828 | |
| 250 | K | A | -1.2383 | |
| 251 | E | A | 0.0000 | |
| 252 | M | A | -0.3733 | |
| 253 | Q | A | -0.3423 | |
| 254 | S | A | 0.0000 | |
| 255 | S | A | 0.0000 | |
| 256 | N | A | -0.2337 | |
| 257 | L | A | 0.0000 | |
| 258 | Y | A | 0.0000 | |
| 259 | M | A | 0.4857 | |
| 260 | S | A | -0.5704 | |
| 261 | M | A | 0.0000 | |
| 262 | S | A | 0.0000 | |
| 263 | S | A | 0.0400 | |
| 264 | W | A | -0.6587 | |
| 265 | C | A | 0.0000 | |
| 266 | Y | A | -0.3982 | |
| 267 | T | A | -0.4913 | |
| 268 | H | A | -1.0072 | |
| 269 | S | A | -0.6960 | |
| 270 | L | A | 0.0000 | |
| 271 | D | A | -1.7473 | |
| 272 | G | A | 0.0000 | |
| 273 | A | A | 0.0000 | |
| 274 | G | A | 0.0000 | |
| 275 | L | A | -0.0023 | |
| 276 | F | A | 0.0000 | |
| 277 | L | A | 0.0000 | |
| 278 | F | A | 1.5501 | |
| 279 | D | A | 0.0485 | |
| 280 | H | A | 0.0000 | |
| 281 | A | A | 0.0000 | |
| 282 | A | A | -0.0444 | |
| 283 | E | A | -0.8314 | |
| 284 | E | A | 0.0000 | |
| 285 | Y | A | -0.8192 | |
| 286 | E | A | -2.3082 | |
| 287 | H | A | 0.0000 | |
| 288 | A | A | 0.0000 | |
| 289 | K | A | -1.9269 | |
| 290 | K | A | -1.2723 | |
| 291 | L | A | 0.0000 | |
| 292 | I | A | -0.3719 | |
| 293 | I | A | -0.0208 | |
| 294 | F | A | -0.5055 | |
| 295 | L | A | 0.0000 | |
| 296 | N | A | -2.0340 | |
| 297 | E | A | -2.4457 | |
| 298 | N | A | -2.4936 | |
| 299 | N | A | -2.7768 | |
| 300 | V | A | 0.0000 | |
| 301 | P | A | -0.9798 | |
| 302 | V | A | -0.3516 | |
| 303 | Q | A | -0.7414 | |
| 304 | L | A | 0.9571 | |
| 305 | T | A | 0.2359 | |
| 306 | S | A | 0.2994 | |
| 307 | I | A | 0.6336 | |
| 308 | S | A | -0.3079 | |
| 309 | A | A | -0.7952 | |
| 310 | P | A | -1.1763 | |
| 311 | E | A | -2.3596 | |
| 312 | H | A | -2.3813 | |
| 313 | K | A | -2.8453 | |
| 314 | F | A | -2.2613 | |
| 315 | E | A | -2.3692 | |
| 316 | G | A | -1.5935 | |
| 317 | L | A | 0.0000 | |
| 318 | T | A | -1.6342 | |
| 319 | Q | A | -1.6933 | |
| 320 | I | A | 0.0000 | |
| 321 | F | A | 0.0000 | |
| 322 | Q | A | -1.8809 | |
| 323 | K | A | -1.7250 | |
| 324 | A | A | 0.0000 | |
| 325 | Y | A | -1.6389 | |
| 326 | E | A | -2.5272 | |
| 327 | H | A | -1.9137 | |
| 328 | E | A | 0.0000 | |
| 329 | Q | A | -2.4668 | |
| 330 | H | A | -2.5816 | |
| 331 | I | A | 0.0000 | |
| 332 | S | A | 0.0000 | |
| 333 | E | A | -2.8347 | |
| 334 | S | A | -2.0442 | |
| 335 | I | A | 0.0000 | |
| 336 | N | A | -2.1175 | |
| 337 | N | A | -1.7304 | |
| 338 | I | A | 0.0000 | |
| 339 | V | A | -1.0623 | |
| 340 | D | A | -1.4663 | |
| 341 | H | A | -1.5885 | |
| 342 | A | A | 0.0000 | |
| 343 | I | A | -0.4745 | |
| 344 | K | A | -2.0103 | |
| 345 | S | A | -1.8268 | |
| 346 | K | A | -2.1810 | |
| 347 | D | A | -1.6619 | |
| 348 | H | A | -1.4913 | |
| 349 | A | A | -1.0218 | |
| 350 | T | A | 0.0000 | |
| 351 | F | A | -0.5195 | |
| 352 | N | A | -1.2018 | |
| 353 | F | A | -0.2096 | |
| 354 | L | A | 0.0000 | |
| 355 | Q | A | -0.4927 | |
| 356 | W | A | 0.0453 | |
| 357 | Y | A | 0.0000 | |
| 358 | V | A | -0.5610 | |
| 359 | A | A | -0.7208 | |
| 360 | E | A | -0.9841 | |
| 361 | Q | A | 0.0000 | |
| 362 | H | A | -1.5265 | |
| 363 | E | A | -1.9063 | |
| 364 | E | A | 0.0000 | |
| 365 | E | A | -1.1845 | |
| 366 | V | A | 0.0597 | |
| 367 | L | A | -0.4413 | |
| 368 | F | A | 0.0000 | |
| 369 | K | A | -2.1561 | |
| 370 | D | A | -2.2738 | |
| 371 | I | A | 0.0000 | |
| 372 | L | A | -1.9857 | |
| 373 | D | A | -3.0132 | |
| 374 | K | A | -1.7125 | |
| 375 | I | A | 0.0000 | |
| 376 | E | A | -2.1188 | |
| 377 | L | A | -0.0231 | |
| 378 | I | A | -0.2357 | |
| 379 | G | A | -1.5655 | |
| 380 | N | A | -2.2396 | |
| 381 | E | A | -3.1696 | |
| 382 | N | A | -2.5052 | |
| 383 | H | A | -1.3765 | |
| 384 | G | A | 0.0000 | |
| 385 | L | A | 0.4680 | |
| 386 | Y | A | 1.3260 | |
| 387 | L | A | 1.3287 | |
| 388 | A | A | 0.0000 | |
| 389 | D | A | 0.0000 | |
| 390 | Q | A | 0.1182 | |
| 391 | Y | A | 0.4498 | |
| 392 | V | A | 0.0000 | |
| 393 | K | A | -1.4149 | |
| 394 | G | A | -1.2864 | |
| 395 | I | A | -1.1571 | |
| 396 | A | A | 0.0000 | |
| 397 | K | A | -2.9319 | |
| 398 | S | A | -2.2057 | |
| 399 | R | A | -2.4665 | |
| 400 | K | A | -2.8886 | |
| 401 | S | A | -1.7955 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine