Project name: initial [mutate: VR11A] [mutate: RV11A] [mutate: KV22A]

Status: done

Started: 2026-07-09 05:35:43
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Chain sequence(s) A: GIPEFKQKALVAKVSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVLQKYSEWTSPAEDS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues KV22A
Energy difference between WT (input) and mutated protein (by FoldX) 0.719076 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:54)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:34)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:28)
Show buried residues

Minimal score value
-3.7519
Maximal score value
2.0143
Average score
-1.0114
Total score value
-102.1545

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2545
2 I A 1.4476
3 P A 0.1755
4 E A -1.4046
5 F A -0.2795
6 K A -1.8805
7 Q A -2.2546
8 K A -2.2416
9 A A -0.4279
10 L A 1.1071
11 V A 2.0143
12 A A 0.5451
13 K A -0.7570
14 V A 0.0232
15 S A -1.4334
16 Q A -1.9529
17 R A -2.5115
18 E A -3.1877
19 E A -2.7704
20 M A 0.0000
21 V A -1.6670
22 V A -0.4713 mutated: KV22A
23 K A -1.4161
24 C A 0.0000
25 L A -0.6119
26 G A -1.0277
27 E A -1.4332
28 L A 0.0000
29 T A -1.4367
30 E A -2.5609
31 V A 0.0000
32 C A 0.0000
33 K A -2.0475
34 S A -1.4140
35 L A 0.0000
36 G A 0.0000
37 K A -1.0638
38 V A 1.1137
39 F A 0.9664
40 G A 0.1547
41 V A 0.1577
42 H A -0.5016
43 Y A -0.4919
44 F A 1.0490
45 N A 0.0461
46 I A 0.0000
47 F A 0.0000
48 N A -1.2204
49 T A -0.7085
50 V A -1.0588
51 T A 0.0000
52 L A 0.0000
53 K A -1.6817
54 K A -2.2735
55 L A 0.0000
56 A A 0.0000
57 E A -2.4006
58 S A -1.3936
59 L A 0.0000
60 S A -0.9548
61 S A -1.1168
62 D A -1.0834
63 P A -1.6451
64 E A -2.1520
65 V A -0.9293
66 L A 0.0000
67 L A -2.0214
68 Q A -2.0763
69 I A 0.0000
70 D A -2.5863
71 G A -1.7486
72 V A 0.0000
73 T A -2.6532
74 E A -3.7519
75 D A -3.7406
76 K A -2.7388
77 L A -2.8507
78 E A -3.6579
79 K A -2.9622
80 Y A 0.0000
81 G A 0.0000
82 A A -1.0955
83 E A -1.2785
84 V A 0.0000
85 I A -0.5316
86 S A -0.6820
87 V A -0.8356
88 L A 0.0000
89 Q A -1.8200
90 K A -1.6145
91 Y A 0.0000
92 S A -1.3848
93 E A -2.5032
94 W A -0.7390
95 T A -0.6508
96 S A -0.7604
97 P A -1.0806
98 A A -1.9341
99 E A -3.1603
100 D A -2.9997
101 S A -1.4872
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Laboratory of Theory of Biopolymers 2018