| Chain sequence(s) |
A: GIPEFKQKALVAKVSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVLQKYSEWTSPAEDS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | KV22A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.719076 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:54)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:34)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:28)
[INFO] Main: Simulation completed successfully. (00:02:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.2545 | |
| 2 | I | A | 1.4476 | |
| 3 | P | A | 0.1755 | |
| 4 | E | A | -1.4046 | |
| 5 | F | A | -0.2795 | |
| 6 | K | A | -1.8805 | |
| 7 | Q | A | -2.2546 | |
| 8 | K | A | -2.2416 | |
| 9 | A | A | -0.4279 | |
| 10 | L | A | 1.1071 | |
| 11 | V | A | 2.0143 | |
| 12 | A | A | 0.5451 | |
| 13 | K | A | -0.7570 | |
| 14 | V | A | 0.0232 | |
| 15 | S | A | -1.4334 | |
| 16 | Q | A | -1.9529 | |
| 17 | R | A | -2.5115 | |
| 18 | E | A | -3.1877 | |
| 19 | E | A | -2.7704 | |
| 20 | M | A | 0.0000 | |
| 21 | V | A | -1.6670 | |
| 22 | V | A | -0.4713 | mutated: KV22A |
| 23 | K | A | -1.4161 | |
| 24 | C | A | 0.0000 | |
| 25 | L | A | -0.6119 | |
| 26 | G | A | -1.0277 | |
| 27 | E | A | -1.4332 | |
| 28 | L | A | 0.0000 | |
| 29 | T | A | -1.4367 | |
| 30 | E | A | -2.5609 | |
| 31 | V | A | 0.0000 | |
| 32 | C | A | 0.0000 | |
| 33 | K | A | -2.0475 | |
| 34 | S | A | -1.4140 | |
| 35 | L | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | K | A | -1.0638 | |
| 38 | V | A | 1.1137 | |
| 39 | F | A | 0.9664 | |
| 40 | G | A | 0.1547 | |
| 41 | V | A | 0.1577 | |
| 42 | H | A | -0.5016 | |
| 43 | Y | A | -0.4919 | |
| 44 | F | A | 1.0490 | |
| 45 | N | A | 0.0461 | |
| 46 | I | A | 0.0000 | |
| 47 | F | A | 0.0000 | |
| 48 | N | A | -1.2204 | |
| 49 | T | A | -0.7085 | |
| 50 | V | A | -1.0588 | |
| 51 | T | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | K | A | -1.6817 | |
| 54 | K | A | -2.2735 | |
| 55 | L | A | 0.0000 | |
| 56 | A | A | 0.0000 | |
| 57 | E | A | -2.4006 | |
| 58 | S | A | -1.3936 | |
| 59 | L | A | 0.0000 | |
| 60 | S | A | -0.9548 | |
| 61 | S | A | -1.1168 | |
| 62 | D | A | -1.0834 | |
| 63 | P | A | -1.6451 | |
| 64 | E | A | -2.1520 | |
| 65 | V | A | -0.9293 | |
| 66 | L | A | 0.0000 | |
| 67 | L | A | -2.0214 | |
| 68 | Q | A | -2.0763 | |
| 69 | I | A | 0.0000 | |
| 70 | D | A | -2.5863 | |
| 71 | G | A | -1.7486 | |
| 72 | V | A | 0.0000 | |
| 73 | T | A | -2.6532 | |
| 74 | E | A | -3.7519 | |
| 75 | D | A | -3.7406 | |
| 76 | K | A | -2.7388 | |
| 77 | L | A | -2.8507 | |
| 78 | E | A | -3.6579 | |
| 79 | K | A | -2.9622 | |
| 80 | Y | A | 0.0000 | |
| 81 | G | A | 0.0000 | |
| 82 | A | A | -1.0955 | |
| 83 | E | A | -1.2785 | |
| 84 | V | A | 0.0000 | |
| 85 | I | A | -0.5316 | |
| 86 | S | A | -0.6820 | |
| 87 | V | A | -0.8356 | |
| 88 | L | A | 0.0000 | |
| 89 | Q | A | -1.8200 | |
| 90 | K | A | -1.6145 | |
| 91 | Y | A | 0.0000 | |
| 92 | S | A | -1.3848 | |
| 93 | E | A | -2.5032 | |
| 94 | W | A | -0.7390 | |
| 95 | T | A | -0.6508 | |
| 96 | S | A | -0.7604 | |
| 97 | P | A | -1.0806 | |
| 98 | A | A | -1.9341 | |
| 99 | E | A | -3.1603 | |
| 100 | D | A | -2.9997 | |
| 101 | S | A | -1.4872 |