| Chain sequence(s) |
A: LRKEPEIITVTLKKQNRMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLAT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | -0.0043 | |
| 2 | R | A | -2.7290 | |
| 3 | K | A | -3.1691 | |
| 4 | E | A | -3.1489 | |
| 5 | P | A | -2.0211 | |
| 6 | E | A | -2.2283 | |
| 7 | I | A | -0.0144 | |
| 8 | I | A | 0.1067 | |
| 9 | T | A | -0.1103 | |
| 10 | V | A | 0.0000 | |
| 11 | T | A | -0.7912 | |
| 12 | L | A | 0.0000 | |
| 13 | K | A | -2.2236 | |
| 14 | K | A | -2.5708 | |
| 15 | Q | A | -2.8725 | |
| 16 | N | A | -3.0416 | |
| 17 | R | A | -2.9928 | |
| 18 | M | A | 0.0000 | |
| 19 | G | A | -0.6418 | |
| 20 | L | A | -0.1329 | |
| 21 | S | A | -0.0431 | |
| 22 | I | A | -0.4887 | |
| 23 | V | A | -0.2819 | |
| 24 | A | A | -0.7140 | |
| 25 | A | A | -0.8180 | |
| 26 | K | A | -2.4602 | |
| 27 | G | A | -1.3290 | |
| 28 | A | A | -1.0601 | |
| 29 | G | A | -1.7315 | |
| 30 | Q | A | -2.6127 | |
| 31 | D | A | -3.1571 | |
| 32 | K | A | -2.6459 | |
| 33 | L | A | -1.3180 | |
| 34 | G | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | K | A | -1.3365 | |
| 39 | S | A | -0.5915 | |
| 40 | V | A | 0.2165 | |
| 41 | V | A | 0.2777 | |
| 42 | K | A | -1.0458 | |
| 43 | G | A | -0.6838 | |
| 44 | G | A | -0.9290 | |
| 45 | A | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | D | A | -0.3628 | |
| 48 | V | A | 0.5258 | |
| 49 | D | A | -0.7818 | |
| 50 | G | A | -0.9291 | |
| 51 | R | A | -1.5011 | |
| 52 | L | A | 0.0000 | |
| 53 | A | A | -0.6709 | |
| 54 | A | A | -0.7112 | |
| 55 | G | A | -0.4688 | |
| 56 | D | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | -0.0882 | |
| 60 | S | A | -1.1877 | |
| 61 | V | A | 0.0000 | |
| 62 | D | A | -2.1298 | |
| 63 | G | A | -2.0555 | |
| 64 | R | A | -2.2603 | |
| 65 | S | A | -1.0828 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.1417 | |
| 68 | G | A | -0.9862 | |
| 69 | L | A | -0.8232 | |
| 70 | S | A | -1.5688 | |
| 71 | Q | A | -2.0063 | |
| 72 | E | A | -3.1936 | |
| 73 | R | A | -3.2603 | |
| 74 | A | A | 0.0000 | |
| 75 | A | A | -2.0285 | |
| 76 | E | A | -2.7496 | |
| 77 | L | A | -1.9984 | |
| 78 | M | A | 0.0000 | |
| 79 | T | A | -2.0167 | |
| 80 | R | A | -2.1404 | |
| 81 | T | A | -1.2969 | |
| 82 | S | A | -0.9792 | |
| 83 | S | A | -1.4862 | |
| 84 | V | A | -0.6029 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -1.1417 | |
| 87 | L | A | 0.0000 | |
| 88 | E | A | -1.0602 | |
| 89 | V | A | 0.0000 | |
| 90 | A | A | 0.0000 | |
| 91 | K | A | -1.2257 | |
| 92 | Q | A | -1.0408 | |
| 93 | G | A | 0.0000 | |
| 94 | A | A | 0.0556 | |
| 95 | I | A | 1.0132 | |
| 96 | Y | A | -0.0377 | |
| 97 | H | A | -0.3434 | |
| 98 | G | A | 0.1067 | |
| 99 | L | A | 0.4012 | |
| 100 | A | A | 0.5659 | |
| 101 | T | A | 0.2501 |