Project name: query_structure

Status: done

Started: 2026-03-16 23:53:25
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Chain sequence(s) A: LRKEPEIITVTLKKQNRMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLAT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:04)
Show buried residues

Minimal score value
-3.2603
Maximal score value
1.0132
Average score
-0.9356
Total score value
-94.495

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A -0.0043
2 R A -2.7290
3 K A -3.1691
4 E A -3.1489
5 P A -2.0211
6 E A -2.2283
7 I A -0.0144
8 I A 0.1067
9 T A -0.1103
10 V A 0.0000
11 T A -0.7912
12 L A 0.0000
13 K A -2.2236
14 K A -2.5708
15 Q A -2.8725
16 N A -3.0416
17 R A -2.9928
18 M A 0.0000
19 G A -0.6418
20 L A -0.1329
21 S A -0.0431
22 I A -0.4887
23 V A -0.2819
24 A A -0.7140
25 A A -0.8180
26 K A -2.4602
27 G A -1.3290
28 A A -1.0601
29 G A -1.7315
30 Q A -2.6127
31 D A -3.1571
32 K A -2.6459
33 L A -1.3180
34 G A 0.0000
35 I A 0.0000
36 Y A 0.0000
37 V A 0.0000
38 K A -1.3365
39 S A -0.5915
40 V A 0.2165
41 V A 0.2777
42 K A -1.0458
43 G A -0.6838
44 G A -0.9290
45 A A 0.0000
46 A A 0.0000
47 D A -0.3628
48 V A 0.5258
49 D A -0.7818
50 G A -0.9291
51 R A -1.5011
52 L A 0.0000
53 A A -0.6709
54 A A -0.7112
55 G A -0.4688
56 D A 0.0000
57 Q A 0.0000
58 L A 0.0000
59 L A -0.0882
60 S A -1.1877
61 V A 0.0000
62 D A -2.1298
63 G A -2.0555
64 R A -2.2603
65 S A -1.0828
66 L A 0.0000
67 V A 0.1417
68 G A -0.9862
69 L A -0.8232
70 S A -1.5688
71 Q A -2.0063
72 E A -3.1936
73 R A -3.2603
74 A A 0.0000
75 A A -2.0285
76 E A -2.7496
77 L A -1.9984
78 M A 0.0000
79 T A -2.0167
80 R A -2.1404
81 T A -1.2969
82 S A -0.9792
83 S A -1.4862
84 V A -0.6029
85 V A 0.0000
86 T A -1.1417
87 L A 0.0000
88 E A -1.0602
89 V A 0.0000
90 A A 0.0000
91 K A -1.2257
92 Q A -1.0408
93 G A 0.0000
94 A A 0.0556
95 I A 1.0132
96 Y A -0.0377
97 H A -0.3434
98 G A 0.1067
99 L A 0.4012
100 A A 0.5659
101 T A 0.2501
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Laboratory of Theory of Biopolymers 2018