| Chain sequence(s) |
A: YEEYCTANAVTGPCRASFPRYFDVERNSCNNFIYGGCRGNKNSYRSEEACMLRCFRQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | -1.2319 | |
| 2 | E | A | -2.6389 | |
| 3 | E | A | -3.0582 | |
| 4 | Y | A | -1.8952 | |
| 5 | C | A | 0.0000 | |
| 6 | T | A | -1.4987 | |
| 7 | A | A | -1.6425 | |
| 8 | N | A | -1.5844 | |
| 9 | A | A | -0.2781 | |
| 10 | V | A | 0.1640 | |
| 11 | T | A | 0.3191 | |
| 12 | G | A | -0.7126 | |
| 13 | P | A | -0.9223 | |
| 14 | C | A | -1.1476 | |
| 15 | R | A | -1.5307 | |
| 16 | A | A | -0.5034 | |
| 17 | S | A | 0.1856 | |
| 18 | F | A | 0.3781 | |
| 19 | P | A | 0.0294 | |
| 20 | R | A | -0.7464 | |
| 21 | Y | A | -0.4125 | |
| 22 | F | A | 0.0000 | |
| 23 | D | A | 0.0000 | |
| 24 | V | A | -0.9783 | |
| 25 | E | A | -2.6615 | |
| 26 | R | A | -3.1212 | |
| 27 | N | A | -2.0950 | |
| 28 | S | A | -1.3694 | |
| 29 | C | A | 0.0000 | |
| 30 | N | A | -1.2625 | |
| 31 | N | A | -0.7065 | |
| 32 | F | A | 1.3502 | |
| 33 | I | A | 1.9602 | |
| 34 | Y | A | 0.5930 | |
| 35 | G | A | 0.0000 | |
| 36 | G | A | -0.4606 | |
| 37 | C | A | -1.1109 | |
| 38 | R | A | -2.0472 | |
| 39 | G | A | -1.4632 | |
| 40 | N | A | -1.9051 | |
| 41 | K | A | -2.6685 | |
| 42 | N | A | 0.0000 | |
| 43 | S | A | -0.9347 | |
| 44 | Y | A | 0.0000 | |
| 45 | R | A | -2.2736 | |
| 46 | S | A | -2.0552 | |
| 47 | E | A | -2.4156 | |
| 48 | E | A | -2.1116 | |
| 49 | A | A | -1.1691 | |
| 50 | C | A | 0.0000 | |
| 51 | M | A | -0.0839 | |
| 52 | L | A | 0.3157 | |
| 53 | R | A | -0.5680 | |
| 54 | C | A | 0.0000 | |
| 55 | F | A | 0.6112 | |
| 56 | R | A | -1.3503 | |
| 57 | Q | A | -1.4352 |