Project name: AF-P37840_5c10f9eb5052282

Status: done

Started: 2026-06-01 08:50:08
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Chain sequence(s) A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues AT53A
Energy difference between WT (input) and mutated protein (by FoldX) 0.402381 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:02:14)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:16)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:19)
Show buried residues

Minimal score value
-4.01
Maximal score value
3.4018
Average score
-0.7581
Total score value
-106.1271

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.2446
2 D A -0.0075
3 V A 1.7792
4 F A 2.2153
5 M A 0.8656
6 K A -1.0425
7 G A -0.6682
8 L A -0.4743
9 S A -1.5551
10 K A -2.6015
11 A A -1.6026
12 K A -2.1838
13 E A -2.1521
14 G A -0.9402
15 V A 0.6376
16 V A 0.5354
17 A A -0.6881
18 A A -0.8093
19 A A -1.1258
20 E A -2.7068
21 K A -2.9112
22 T A -2.2643
23 K A -3.2002
24 Q A -3.0974
25 G A -1.8445
26 V A -0.2680
27 A A -1.3343
28 E A -2.5025
29 A A -1.6283
30 A A -1.5148
31 G A -2.3314
32 K A -3.1031
33 T A -1.8385
34 K A -2.3034
35 E A -1.7769
36 G A 0.0645
37 V A 1.6848
38 L A 1.7151
39 Y A 1.8566
40 V A 2.0005
41 G A 0.6134
42 S A -0.2711
43 K A -1.2456
44 T A -0.9636
45 K A -2.0002
46 E A -2.2895
47 G A -1.1276
48 V A 1.0928
49 V A 1.4119
50 H A 0.1641
51 G A 1.0331
52 V A 2.3559
53 T A 0.9006 mutated: AT53A
54 T A 0.1757
55 V A 0.7296
56 A A -1.0667
57 E A -2.9485
58 K A -3.0452
59 T A -2.4166
60 K A -3.3086
61 E A -3.6842
62 Q A -2.5155
63 V A -0.3230
64 T A -0.9117
65 N A -0.9589
66 V A 1.5263
67 G A 1.3333
68 G A 0.9930
69 A A 1.8718
70 V A 3.1483
71 V A 3.4018
72 T A 2.1099
73 G A 2.0944
74 V A 3.0166
75 T A 1.4825
76 A A 0.9237
77 V A 1.6292
78 A A 0.4363
79 Q A -1.0045
80 K A -1.6132
81 T A -0.5676
82 V A 0.2884
83 E A -1.6365
84 G A -0.7327
85 A A 0.1472
86 G A -0.0213
87 S A 0.3027
88 I A 1.9310
89 A A 1.2180
90 A A 1.1351
91 A A 1.0269
92 T A 1.1332
93 G A 0.7304
94 F A 1.8390
95 V A 0.5119
96 K A -1.8782
97 K A -2.7569
98 D A -3.2269
99 Q A -2.5647
100 L A -0.8736
101 G A -1.9952
102 K A -3.0640
103 N A -3.4809
104 E A -4.0100
105 E A -3.5416
106 G A -2.3426
107 A A -1.7675
108 P A -1.8165
109 Q A -2.1118
110 E A -1.7986
111 G A -0.6105
112 I A 0.8194
113 L A 0.9009
114 E A -0.9854
115 D A -1.1813
116 M A -0.0075
117 P A -0.2989
118 V A 0.2473
119 D A -2.1804
120 P A -2.2639
121 D A -3.4454
122 N A -3.0805
123 E A -3.1103
124 A A -1.3561
125 Y A -0.0930
126 E A -1.0333
127 M A 0.0492
128 P A -0.9962
129 S A -1.9094
130 E A -2.5436
131 E A -2.8674
132 G A -1.9756
133 Y A -0.6972
134 Q A -1.7345
135 D A -1.9995
136 Y A -0.9296
137 E A -2.5289
138 P A -1.8737
139 E A -2.2307
140 A A -1.1604
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Laboratory of Theory of Biopolymers 2018