| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | AT53A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.402381 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:02:14)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:16)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:18)
[INFO] Main: Simulation completed successfully. (00:03:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2446 | |
| 2 | D | A | -0.0075 | |
| 3 | V | A | 1.7792 | |
| 4 | F | A | 2.2153 | |
| 5 | M | A | 0.8656 | |
| 6 | K | A | -1.0425 | |
| 7 | G | A | -0.6682 | |
| 8 | L | A | -0.4743 | |
| 9 | S | A | -1.5551 | |
| 10 | K | A | -2.6015 | |
| 11 | A | A | -1.6026 | |
| 12 | K | A | -2.1838 | |
| 13 | E | A | -2.1521 | |
| 14 | G | A | -0.9402 | |
| 15 | V | A | 0.6376 | |
| 16 | V | A | 0.5354 | |
| 17 | A | A | -0.6881 | |
| 18 | A | A | -0.8093 | |
| 19 | A | A | -1.1258 | |
| 20 | E | A | -2.7068 | |
| 21 | K | A | -2.9112 | |
| 22 | T | A | -2.2643 | |
| 23 | K | A | -3.2002 | |
| 24 | Q | A | -3.0974 | |
| 25 | G | A | -1.8445 | |
| 26 | V | A | -0.2680 | |
| 27 | A | A | -1.3343 | |
| 28 | E | A | -2.5025 | |
| 29 | A | A | -1.6283 | |
| 30 | A | A | -1.5148 | |
| 31 | G | A | -2.3314 | |
| 32 | K | A | -3.1031 | |
| 33 | T | A | -1.8385 | |
| 34 | K | A | -2.3034 | |
| 35 | E | A | -1.7769 | |
| 36 | G | A | 0.0645 | |
| 37 | V | A | 1.6848 | |
| 38 | L | A | 1.7151 | |
| 39 | Y | A | 1.8566 | |
| 40 | V | A | 2.0005 | |
| 41 | G | A | 0.6134 | |
| 42 | S | A | -0.2711 | |
| 43 | K | A | -1.2456 | |
| 44 | T | A | -0.9636 | |
| 45 | K | A | -2.0002 | |
| 46 | E | A | -2.2895 | |
| 47 | G | A | -1.1276 | |
| 48 | V | A | 1.0928 | |
| 49 | V | A | 1.4119 | |
| 50 | H | A | 0.1641 | |
| 51 | G | A | 1.0331 | |
| 52 | V | A | 2.3559 | |
| 53 | T | A | 0.9006 | mutated: AT53A |
| 54 | T | A | 0.1757 | |
| 55 | V | A | 0.7296 | |
| 56 | A | A | -1.0667 | |
| 57 | E | A | -2.9485 | |
| 58 | K | A | -3.0452 | |
| 59 | T | A | -2.4166 | |
| 60 | K | A | -3.3086 | |
| 61 | E | A | -3.6842 | |
| 62 | Q | A | -2.5155 | |
| 63 | V | A | -0.3230 | |
| 64 | T | A | -0.9117 | |
| 65 | N | A | -0.9589 | |
| 66 | V | A | 1.5263 | |
| 67 | G | A | 1.3333 | |
| 68 | G | A | 0.9930 | |
| 69 | A | A | 1.8718 | |
| 70 | V | A | 3.1483 | |
| 71 | V | A | 3.4018 | |
| 72 | T | A | 2.1099 | |
| 73 | G | A | 2.0944 | |
| 74 | V | A | 3.0166 | |
| 75 | T | A | 1.4825 | |
| 76 | A | A | 0.9237 | |
| 77 | V | A | 1.6292 | |
| 78 | A | A | 0.4363 | |
| 79 | Q | A | -1.0045 | |
| 80 | K | A | -1.6132 | |
| 81 | T | A | -0.5676 | |
| 82 | V | A | 0.2884 | |
| 83 | E | A | -1.6365 | |
| 84 | G | A | -0.7327 | |
| 85 | A | A | 0.1472 | |
| 86 | G | A | -0.0213 | |
| 87 | S | A | 0.3027 | |
| 88 | I | A | 1.9310 | |
| 89 | A | A | 1.2180 | |
| 90 | A | A | 1.1351 | |
| 91 | A | A | 1.0269 | |
| 92 | T | A | 1.1332 | |
| 93 | G | A | 0.7304 | |
| 94 | F | A | 1.8390 | |
| 95 | V | A | 0.5119 | |
| 96 | K | A | -1.8782 | |
| 97 | K | A | -2.7569 | |
| 98 | D | A | -3.2269 | |
| 99 | Q | A | -2.5647 | |
| 100 | L | A | -0.8736 | |
| 101 | G | A | -1.9952 | |
| 102 | K | A | -3.0640 | |
| 103 | N | A | -3.4809 | |
| 104 | E | A | -4.0100 | |
| 105 | E | A | -3.5416 | |
| 106 | G | A | -2.3426 | |
| 107 | A | A | -1.7675 | |
| 108 | P | A | -1.8165 | |
| 109 | Q | A | -2.1118 | |
| 110 | E | A | -1.7986 | |
| 111 | G | A | -0.6105 | |
| 112 | I | A | 0.8194 | |
| 113 | L | A | 0.9009 | |
| 114 | E | A | -0.9854 | |
| 115 | D | A | -1.1813 | |
| 116 | M | A | -0.0075 | |
| 117 | P | A | -0.2989 | |
| 118 | V | A | 0.2473 | |
| 119 | D | A | -2.1804 | |
| 120 | P | A | -2.2639 | |
| 121 | D | A | -3.4454 | |
| 122 | N | A | -3.0805 | |
| 123 | E | A | -3.1103 | |
| 124 | A | A | -1.3561 | |
| 125 | Y | A | -0.0930 | |
| 126 | E | A | -1.0333 | |
| 127 | M | A | 0.0492 | |
| 128 | P | A | -0.9962 | |
| 129 | S | A | -1.9094 | |
| 130 | E | A | -2.5436 | |
| 131 | E | A | -2.8674 | |
| 132 | G | A | -1.9756 | |
| 133 | Y | A | -0.6972 | |
| 134 | Q | A | -1.7345 | |
| 135 | D | A | -1.9995 | |
| 136 | Y | A | -0.9296 | |
| 137 | E | A | -2.5289 | |
| 138 | P | A | -1.8737 | |
| 139 | E | A | -2.2307 | |
| 140 | A | A | -1.1604 |