| Chain sequence(s) |
A: FEKGHFEF
C: FEKGHFEF B: FEKGHFEF E: FEKGHFEF D: FEKGHFEF G: FEKGHFEF F: FEKGHFEF I: FEKGHFEF H: FEKGHFEF K: FEKGHFEF J: FEKGHFEF L: FEKGHFEF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:55)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.1247 | |
| 2 | E | A | -1.3525 | |
| 3 | K | A | -2.1906 | |
| 4 | G | A | -1.4607 | |
| 5 | H | A | -1.6245 | |
| 6 | F | A | -0.7596 | |
| 7 | E | A | -0.9529 | |
| 8 | F | A | 1.3012 | |
| 1 | F | B | 1.9541 | |
| 2 | E | B | 0.3665 | |
| 3 | K | B | -0.8372 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | -1.1451 | |
| 6 | F | B | -0.6473 | |
| 7 | E | B | -0.7503 | |
| 8 | F | B | 0.8955 | |
| 1 | F | C | 2.3404 | |
| 2 | E | C | 0.5318 | |
| 3 | K | C | -0.2763 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | -0.4943 | |
| 6 | F | C | -0.4059 | |
| 7 | E | C | -0.0802 | |
| 8 | F | C | 1.1309 | |
| 1 | F | D | 2.3257 | |
| 2 | E | D | 0.6934 | |
| 3 | K | D | -0.1614 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -0.4273 | |
| 6 | F | D | -0.1231 | |
| 7 | E | D | 0.2894 | |
| 8 | F | D | 1.6300 | |
| 1 | F | E | 2.3812 | |
| 2 | E | E | 0.7138 | |
| 3 | K | E | -0.1119 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | -0.4729 | |
| 6 | F | E | -0.1095 | |
| 7 | E | E | 0.3241 | |
| 8 | F | E | 1.5843 | |
| 1 | F | F | 2.4475 | |
| 2 | E | F | 0.7248 | |
| 3 | K | F | -0.0938 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | -0.3447 | |
| 6 | F | F | 0.0598 | |
| 7 | E | F | 0.4780 | |
| 8 | F | F | 1.9415 | |
| 1 | F | G | 2.5404 | |
| 2 | E | G | 1.5036 | |
| 3 | K | G | 0.6166 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -0.3171 | |
| 6 | F | G | -0.1917 | |
| 7 | E | G | -0.0612 | |
| 8 | F | G | 1.3285 | |
| 1 | F | H | 2.0062 | |
| 2 | E | H | -0.4681 | |
| 3 | K | H | -0.9488 | |
| 4 | G | H | 0.0000 | |
| 5 | H | H | -0.4001 | |
| 6 | F | H | 0.7551 | |
| 7 | E | H | 1.2683 | |
| 8 | F | H | 2.9709 | |
| 1 | F | I | 1.9663 | |
| 2 | E | I | -0.0774 | |
| 3 | K | I | -1.2554 | |
| 4 | G | I | -1.2824 | |
| 5 | H | I | -0.4986 | |
| 6 | F | I | 0.9979 | |
| 7 | E | I | 1.2161 | |
| 8 | F | I | 2.8760 | |
| 1 | F | J | 2.4409 | |
| 2 | E | J | 0.2666 | |
| 3 | K | J | -0.8552 | |
| 4 | G | J | -0.8115 | |
| 5 | H | J | -0.5574 | |
| 6 | F | J | 0.2271 | |
| 7 | E | J | 0.7719 | |
| 8 | F | J | 1.9576 | |
| 1 | F | K | 1.3256 | |
| 2 | E | K | -1.1570 | |
| 3 | K | K | -2.0896 | |
| 4 | G | K | -1.4617 | |
| 5 | H | K | -1.6731 | |
| 6 | F | K | -0.7584 | |
| 7 | E | K | -0.8725 | |
| 8 | F | K | 1.3757 | |
| 1 | F | L | 2.0285 | |
| 2 | E | L | 0.7743 | |
| 3 | K | L | -0.4636 | |
| 4 | G | L | 0.0000 | |
| 5 | H | L | -1.1886 | |
| 6 | F | L | -0.7787 | |
| 7 | E | L | -0.4970 | |
| 8 | F | L | 1.2136 |