| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIIVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYQHEGADDRVAYSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRSGPEGHPLPDAPPPSPLYVRPPPSSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9529 | |
| 2 | L | A | 1.9744 | |
| 3 | P | A | 0.6501 | |
| 4 | P | A | 0.3713 | |
| 5 | T | A | 0.1213 | |
| 6 | T | A | 0.1335 | |
| 7 | P | A | 0.1889 | |
| 8 | V | A | 1.2207 | |
| 9 | A | A | 0.0439 | |
| 10 | K | A | -1.1376 | |
| 11 | V | A | -0.3717 | |
| 12 | Q | A | -1.5140 | |
| 13 | S | A | -1.6010 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4325 | |
| 16 | E | A | -2.4471 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4546 | |
| 20 | P | A | 0.1044 | |
| 21 | T | A | 0.1178 | |
| 22 | S | A | -0.1681 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0917 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1801 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6934 | |
| 31 | R | A | -2.5596 | |
| 32 | L | A | -0.7167 | |
| 33 | L | A | 1.2007 | |
| 34 | T | A | 1.5504 | |
| 35 | V | A | 1.8140 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2226 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6367 | |
| 40 | E | A | -1.6520 | |
| 41 | D | A | -0.4402 | |
| 42 | I | A | 1.5166 | |
| 43 | I | A | 2.7589 | |
| 44 | V | A | 2.0813 | |
| 45 | N | A | -0.2763 | |
| 46 | G | A | -0.1634 | |
| 47 | K | A | 0.1385 | |
| 48 | V | A | 2.3390 | |
| 49 | V | A | 2.9367 | |
| 50 | V | A | 1.7249 | |
| 51 | P | A | 0.5022 | |
| 52 | K | A | -0.6450 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1246 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3798 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3016 | |
| 70 | K | A | -1.8166 | |
| 71 | F | A | -0.6720 | |
| 72 | A | A | -0.5739 | |
| 73 | L | A | -0.8635 | |
| 74 | P | A | -1.2648 | |
| 75 | Q | A | -2.4761 | |
| 76 | K | A | -3.0948 | |
| 77 | D | A | -2.9907 | |
| 78 | F | A | -1.6547 | |
| 79 | Y | A | -1.9163 | |
| 80 | D | A | -2.7539 | |
| 81 | P | A | -2.3529 | |
| 82 | E | A | -3.0710 | |
| 83 | K | A | -3.4447 | |
| 84 | E | A | -2.5054 | |
| 85 | R | A | -1.3136 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6289 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9865 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3297 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6611 | |
| 99 | G | A | -0.5230 | |
| 100 | P | A | -0.3823 | |
| 101 | L | A | 0.0838 | |
| 102 | G | A | -0.2428 | |
| 103 | K | A | -0.7240 | |
| 104 | G | A | -0.5018 | |
| 105 | T | A | -0.4815 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1364 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4089 | |
| 110 | L | A | 0.3019 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1031 | |
| 113 | K | A | -0.4283 | |
| 114 | L | A | -1.2490 | |
| 115 | G | A | -1.1751 | |
| 116 | D | A | -1.5302 | |
| 117 | T | A | -1.3003 | |
| 118 | E | A | -2.4823 | |
| 119 | N | A | -2.5315 | |
| 120 | P | A | -2.0689 | |
| 121 | T | A | -1.6351 | |
| 122 | E | A | -2.1880 | |
| 123 | Y | A | -0.6940 | |
| 124 | Q | A | -1.3113 | |
| 125 | H | A | -1.9617 | |
| 126 | E | A | -2.5642 | |
| 127 | G | A | -2.2118 | |
| 128 | A | A | -1.5556 | |
| 129 | D | A | -2.4408 | |
| 130 | D | A | -2.0229 | |
| 131 | R | A | -1.1084 | |
| 132 | V | A | 0.2396 | |
| 133 | A | A | 0.4257 | |
| 134 | Y | A | 0.2476 | |
| 135 | S | A | -0.0888 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5425 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5555 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2469 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0901 | |
| 157 | D | A | 0.3414 | |
| 158 | I | A | 0.8563 | |
| 159 | A | A | 0.1158 | |
| 160 | E | A | -1.4758 | |
| 161 | P | A | -0.2447 | |
| 162 | C | A | 0.1753 | |
| 163 | P | A | -0.1713 | |
| 164 | G | A | -0.0755 | |
| 165 | L | A | 0.5901 | |
| 166 | P | A | -0.1066 | |
| 167 | P | A | -0.3386 | |
| 168 | G | A | -0.4182 | |
| 169 | A | A | -0.0179 | |
| 170 | C | A | 0.7549 | |
| 171 | P | A | 0.5496 | |
| 172 | P | A | 0.7798 | |
| 173 | I | A | 2.0304 | |
| 174 | Q | A | 0.8193 | |
| 175 | L | A | 1.4040 | |
| 176 | V | A | 0.7948 | |
| 177 | N | A | -0.3205 | |
| 178 | S | A | 0.0187 | |
| 179 | V | A | 0.4418 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3838 | |
| 182 | D | A | 0.0842 | |
| 183 | G | A | -0.1583 | |
| 184 | D | A | -0.5669 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1595 | |
| 190 | F | A | 0.0564 | |
| 191 | G | A | -0.1049 | |
| 192 | N | A | -0.2963 | |
| 193 | M | A | -0.1686 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4128 | |
| 197 | E | A | -2.6162 | |
| 198 | L | A | -1.2142 | |
| 199 | Q | A | -2.5371 | |
| 200 | Q | A | -3.3407 | |
| 201 | D | A | -3.6024 | |
| 202 | R | A | -3.3444 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1795 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3821 | |
| 211 | S | A | -1.9284 | |
| 212 | T | A | -1.4894 | |
| 213 | R | A | -2.1869 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1815 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3227 | |
| 220 | L | A | 0.5463 | |
| 221 | K | A | -1.2170 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9400 | |
| 224 | N | A | -1.6713 | |
| 225 | E | A | -1.3132 | |
| 226 | A | A | -0.6753 | |
| 227 | Y | A | -0.4607 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6983 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1360 | |
| 234 | F | A | 0.0365 | |
| 235 | G | A | -0.8665 | |
| 236 | R | A | -2.5544 | |
| 237 | R | A | -2.6854 | |
| 238 | E | A | -1.9787 | |
| 239 | Q | A | -0.0680 | |
| 240 | V | A | 1.5361 | |
| 241 | Y | A | 1.2472 | |
| 242 | A | A | 0.1706 | |
| 243 | R | A | -1.3017 | |
| 244 | H | A | -1.1242 | |
| 245 | F | A | -0.1338 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8463 | |
| 249 | S | A | -1.4773 | |
| 250 | G | A | -1.2366 | |
| 251 | P | A | -1.1371 | |
| 252 | E | A | -1.3881 | |
| 253 | G | A | -1.2843 | |
| 254 | H | A | -1.4736 | |
| 255 | P | A | -1.3306 | |
| 256 | L | A | -0.3570 | |
| 257 | P | A | -0.8869 | |
| 258 | D | A | -1.9957 | |
| 259 | A | A | -0.9153 | |
| 260 | P | A | -1.0031 | |
| 261 | P | A | -0.7387 | |
| 262 | P | A | -0.1876 | |
| 263 | S | A | -0.0359 | |
| 264 | P | A | 0.7130 | |
| 265 | L | A | 1.5415 | |
| 266 | Y | A | 1.1420 | |
| 267 | V | A | 1.0838 | |
| 268 | R | A | -1.0417 | |
| 269 | P | A | -0.2619 | |
| 270 | P | A | -0.5620 | |
| 271 | P | A | -0.3763 | |
| 272 | S | A | -0.1393 | |
| 273 | S | A | 0.0547 | |
| 274 | P | A | 0.4208 | |
| 275 | Y | A | 1.1050 | |
| 276 | A | A | 0.6964 | |
| 277 | V | A | 1.4840 | |
| 278 | R | A | 0.3704 | |
| 279 | P | A | -0.4384 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.4759 | |
| 282 | D | A | -0.9160 | |
| 283 | Y | A | 0.8645 | |
| 284 | F | A | 0.7263 | |
| 285 | G | A | 0.0934 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9286 | |
| 291 | L | A | 1.6149 | |
| 292 | V | A | 0.6286 | |
| 293 | S | A | -0.1417 | |
| 294 | S | A | -0.9509 | |
| 295 | D | A | -1.8420 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1098 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6944 | |
| 301 | R | A | -1.9910 | |
| 302 | P | A | -0.9993 | |
| 303 | F | A | -0.1643 | |
| 304 | W | A | -0.5030 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0710 | |
| 307 | R | A | -2.9212 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7832 | |
| 310 | G | A | -1.4222 | |
| 311 | N | A | -1.3871 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9697 | |
| 319 | N | A | -0.9022 | |
| 320 | E | A | -1.0553 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3481 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0990 | |
| 333 | N | A | 0.5621 | |
| 334 | F | A | 1.8193 | |
| 335 | T | A | 0.9132 | |
| 336 | I | A | 0.4797 | |
| 337 | S | A | -0.9351 | |
| 338 | Q | A | -1.7137 | |
| 339 | Q | A | -1.2553 | |
| 340 | L | A | 0.6924 | |
| 341 | C | A | 0.3226 | |
| 342 | T | A | -0.4946 | |
| 343 | P | A | -0.9822 | |
| 344 | E | A | -2.3436 | |
| 345 | E | A | -2.6163 | |
| 346 | N | A | -1.5317 | |
| 347 | V | A | 0.4215 | |
| 348 | Y | A | 0.8822 | |
| 349 | D | A | -0.1024 | |
| 350 | P | A | -0.3563 | |
| 351 | S | A | -0.2915 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7485 | |
| 354 | K | A | -1.7559 | |
| 355 | N | A | -1.7475 | |
| 356 | Y | A | -0.0471 | |
| 357 | L | A | 0.6731 | |
| 358 | R | A | 0.9913 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3837 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0184 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8630 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6399 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3054 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3303 | |
| 376 | L | A | -1.7629 | |
| 377 | D | A | -2.0476 | |
| 378 | P | A | -1.0684 | |
| 379 | G | A | -1.0232 | |
| 380 | V | A | -0.9338 | |
| 381 | L | A | -0.5452 | |
| 382 | A | A | -0.6635 | |
| 383 | H | A | -0.8448 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4019 | |
| 386 | T | A | -0.5715 | |
| 387 | M | A | -0.3271 | |
| 388 | N | A | -0.8675 | |
| 389 | P | A | -1.2970 | |
| 390 | T | A | -1.5623 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5144 | |
| 393 | E | A | -3.0949 | |
| 394 | N | A | -2.6937 | |
| 395 | W | A | -1.4567 | |
| 396 | N | A | -1.1120 | |
| 397 | L | A | -0.1045 | |
| 398 | G | A | 0.6237 | |
| 399 | F | A | 2.4807 | |
| 400 | V | A | 2.0869 | |
| 401 | P | A | 0.0927 | |
| 402 | P | A | -1.8428 | |
| 403 | K | A | -3.5369 | |
| 404 | E | A | -3.9121 | |
| 405 | R | A | -4.2713 | |
| 406 | E | A | -3.9149 | |
| 407 | D | A | -2.9289 | |
| 408 | P | A | -1.7959 | |
| 409 | Y | A | -0.9832 | |
| 410 | K | A | -2.0910 | |
| 411 | G | A | -0.6398 | |
| 412 | L | A | 0.6688 | |
| 413 | I | A | 1.5871 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3860 | |
| 416 | E | A | -1.6459 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8899 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9938 | |
| 421 | E | A | -2.6665 | |
| 422 | R | A | -2.3206 | |
| 423 | F | A | -1.1740 | |
| 424 | S | A | -1.3933 | |
| 425 | Q | A | -1.7678 | |
| 426 | D | A | -2.8854 | |
| 427 | L | A | -1.9814 | |
| 428 | D | A | -2.7676 | |
| 429 | Q | A | -2.6083 | |
| 430 | F | A | -1.4269 | |
| 431 | A | A | -0.8879 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5601 | |
| 435 | K | A | -0.7067 | |
| 436 | F | A | 0.1732 | |
| 437 | L | A | 1.0419 | |
| 438 | Y | A | 0.8342 | |
| 439 | Q | A | -0.2580 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine