| Chain sequence(s) |
A: ETVIMKYLLPTAAAGLLLLAAQPAMAQVKLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSVSYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKRAAAEQKLISEEDLN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:53)
[INFO] Main: Simulation completed successfully. (00:03:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.1959 | |
| 2 | T | A | 0.5497 | |
| 3 | V | A | 2.3391 | |
| 4 | I | A | 2.8620 | |
| 5 | M | A | 2.1706 | |
| 6 | K | A | 0.7780 | |
| 7 | Y | A | 2.1157 | |
| 8 | L | A | 2.5319 | |
| 9 | L | A | 2.3051 | |
| 10 | P | A | 1.0211 | |
| 11 | T | A | 0.4594 | |
| 12 | A | A | 0.1315 | |
| 13 | A | A | 0.1323 | |
| 14 | A | A | 0.5014 | |
| 15 | G | A | 0.9888 | |
| 16 | L | A | 2.7421 | |
| 17 | L | A | 3.3883 | |
| 18 | L | A | 3.4727 | |
| 19 | L | A | 2.8324 | |
| 20 | A | A | 1.1594 | |
| 21 | A | A | 0.1275 | |
| 22 | Q | A | -0.8631 | |
| 23 | P | A | -0.4664 | |
| 24 | A | A | -0.0571 | |
| 25 | M | A | 0.5216 | |
| 26 | A | A | -0.2213 | |
| 27 | Q | A | -1.1535 | |
| 28 | V | A | -0.9013 | |
| 29 | K | A | -2.0643 | |
| 30 | L | A | 0.0000 | |
| 31 | Q | A | -1.9641 | |
| 32 | Q | A | 0.0000 | |
| 33 | S | A | -0.9840 | |
| 34 | G | A | -0.9551 | |
| 35 | A | A | -0.2167 | |
| 36 | E | A | -0.3177 | |
| 37 | L | A | 0.8307 | |
| 38 | V | A | -0.3704 | |
| 39 | R | A | -1.8623 | |
| 40 | S | A | -1.7932 | |
| 41 | G | A | -1.2295 | |
| 42 | T | A | -0.9110 | |
| 43 | S | A | -1.0480 | |
| 44 | V | A | 0.0000 | |
| 45 | K | A | -1.8087 | |
| 46 | L | A | 0.0000 | |
| 47 | S | A | -0.6492 | |
| 48 | C | A | 0.0000 | |
| 49 | T | A | -0.8983 | |
| 50 | A | A | 0.0000 | |
| 51 | S | A | -1.3245 | |
| 52 | G | A | -0.8705 | |
| 53 | F | A | -1.1505 | |
| 54 | N | A | -1.8601 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | -2.9162 | |
| 57 | D | A | -2.7630 | |
| 58 | S | A | 0.0000 | |
| 59 | Y | A | -0.9010 | |
| 60 | M | A | 0.0000 | |
| 61 | H | A | 0.0000 | |
| 62 | W | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | R | A | -0.4366 | |
| 65 | Q | A | -0.9470 | |
| 66 | G | A | -1.4890 | |
| 67 | P | A | -1.7205 | |
| 68 | E | A | -2.5670 | |
| 69 | Q | A | -2.3212 | |
| 70 | G | A | -1.2079 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -0.6499 | |
| 73 | W | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | W | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | D | A | 0.0000 | |
| 79 | P | A | 0.0000 | |
| 80 | E | A | -3.4456 | |
| 81 | N | A | -3.0214 | |
| 82 | G | A | -2.5029 | |
| 83 | D | A | -2.8125 | |
| 84 | T | A | -1.4206 | |
| 85 | E | A | -1.0088 | |
| 86 | Y | A | -0.7697 | |
| 87 | A | A | 0.0000 | |
| 88 | P | A | -1.9877 | |
| 89 | K | A | -2.4855 | |
| 90 | F | A | 0.0000 | |
| 91 | Q | A | -2.1008 | |
| 92 | G | A | -1.4830 | |
| 93 | K | A | -1.3900 | |
| 94 | A | A | 0.0000 | |
| 95 | T | A | -0.7518 | |
| 96 | F | A | 0.0000 | |
| 97 | T | A | -0.4969 | |
| 98 | T | A | -0.7926 | |
| 99 | D | A | -0.9298 | |
| 100 | T | A | -1.2286 | |
| 101 | S | A | -0.7114 | |
| 102 | S | A | -0.7305 | |
| 103 | N | A | -0.9381 | |
| 104 | T | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | Y | A | -0.4153 | |
| 107 | L | A | 0.0000 | |
| 108 | Q | A | -1.2801 | |
| 109 | L | A | 0.0000 | |
| 110 | S | A | -0.8809 | |
| 111 | S | A | -0.8448 | |
| 112 | L | A | 0.0000 | |
| 113 | T | A | -1.4239 | |
| 114 | S | A | -1.5042 | |
| 115 | E | A | -1.9823 | |
| 116 | D | A | 0.0000 | |
| 117 | T | A | -0.6098 | |
| 118 | A | A | 0.0000 | |
| 119 | V | A | 0.1043 | |
| 120 | Y | A | 0.0000 | |
| 121 | Y | A | 0.0000 | |
| 122 | C | A | 0.0000 | |
| 123 | N | A | 0.0000 | |
| 124 | E | A | -0.3167 | |
| 125 | G | A | 0.0000 | |
| 126 | T | A | -0.2234 | |
| 127 | P | A | -0.2870 | |
| 128 | T | A | -0.0660 | |
| 129 | G | A | 0.1288 | |
| 130 | P | A | 0.3700 | |
| 131 | Y | A | 1.0157 | |
| 132 | Y | A | 0.0000 | |
| 133 | F | A | 0.0000 | |
| 134 | D | A | -0.4980 | |
| 135 | Y | A | -0.3814 | |
| 136 | W | A | -0.8784 | |
| 137 | G | A | 0.0000 | |
| 138 | Q | A | -1.6785 | |
| 139 | G | A | -0.8496 | |
| 140 | T | A | 0.0000 | |
| 141 | T | A | -0.1029 | |
| 142 | V | A | 0.0000 | |
| 143 | T | A | -0.1607 | |
| 144 | V | A | 0.0000 | |
| 145 | S | A | -0.7871 | |
| 146 | S | A | -1.1945 | |
| 147 | G | A | -1.3527 | |
| 148 | G | A | -1.1843 | |
| 149 | G | A | -1.1083 | |
| 150 | G | A | -1.1995 | |
| 151 | S | A | -0.9838 | |
| 152 | G | A | -1.1583 | |
| 153 | G | A | -1.1676 | |
| 154 | G | A | -1.1837 | |
| 155 | G | A | -1.4259 | |
| 156 | S | A | -1.3142 | |
| 157 | G | A | -1.5518 | |
| 158 | G | A | -1.6520 | |
| 159 | G | A | -1.3574 | |
| 160 | G | A | -1.3411 | |
| 161 | S | A | -1.0349 | |
| 162 | E | A | -1.1345 | |
| 163 | N | A | -0.1211 | |
| 164 | V | A | 1.2285 | |
| 165 | L | A | 0.0000 | |
| 166 | T | A | 0.2312 | |
| 167 | Q | A | 0.0000 | |
| 168 | S | A | -0.0870 | |
| 169 | P | A | 0.1978 | |
| 170 | A | A | 0.4745 | |
| 171 | I | A | 1.0180 | |
| 172 | M | A | 0.0097 | |
| 173 | S | A | -1.2706 | |
| 174 | A | A | 0.0000 | |
| 175 | S | A | -2.1828 | |
| 176 | P | A | -2.0761 | |
| 177 | G | A | -2.3715 | |
| 178 | E | A | -3.2763 | |
| 179 | K | A | -3.3472 | |
| 180 | V | A | 0.0000 | |
| 181 | T | A | -0.4891 | |
| 182 | I | A | 0.0000 | |
| 183 | T | A | -0.2640 | |
| 184 | C | A | 0.0000 | |
| 185 | S | A | -0.1795 | |
| 186 | A | A | 0.0000 | |
| 187 | S | A | -0.1043 | |
| 188 | S | A | -0.4117 | |
| 189 | S | A | -0.4877 | |
| 190 | V | A | 0.0000 | |
| 191 | S | A | -0.0116 | |
| 192 | Y | A | 0.6105 | |
| 193 | M | A | 0.0000 | |
| 194 | H | A | 0.0000 | |
| 195 | W | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | Q | A | 0.0000 | |
| 198 | Q | A | 0.0000 | |
| 199 | K | A | -1.6162 | |
| 200 | P | A | -0.8602 | |
| 201 | G | A | -0.9597 | |
| 202 | T | A | -1.0828 | |
| 203 | S | A | -0.9706 | |
| 204 | P | A | 0.0000 | |
| 205 | K | A | -1.7999 | |
| 206 | L | A | 0.0000 | |
| 207 | W | A | -0.4654 | |
| 208 | I | A | 0.0000 | |
| 209 | Y | A | 0.2995 | |
| 210 | S | A | 0.2188 | |
| 211 | T | A | -0.1612 | |
| 212 | S | A | -0.4618 | |
| 213 | N | A | -0.6317 | |
| 214 | L | A | 0.0257 | |
| 215 | A | A | -0.2034 | |
| 216 | S | A | -0.4312 | |
| 217 | G | A | -0.4007 | |
| 218 | V | A | -0.1057 | |
| 219 | P | A | -0.1210 | |
| 220 | A | A | -0.1027 | |
| 221 | R | A | -1.1368 | |
| 222 | F | A | 0.0000 | |
| 223 | S | A | -0.3727 | |
| 224 | G | A | 0.0000 | |
| 225 | S | A | -0.6509 | |
| 226 | G | A | -0.6152 | |
| 227 | S | A | -0.5293 | |
| 228 | G | A | -0.5231 | |
| 229 | T | A | -0.5941 | |
| 230 | S | A | -0.6031 | |
| 231 | Y | A | 0.0000 | |
| 232 | S | A | -0.3605 | |
| 233 | L | A | 0.0000 | |
| 234 | T | A | -0.7918 | |
| 235 | I | A | 0.0000 | |
| 236 | S | A | -2.2392 | |
| 237 | R | A | -3.4426 | |
| 238 | M | A | 0.0000 | |
| 239 | E | A | -2.4190 | |
| 240 | A | A | -1.5869 | |
| 241 | E | A | -2.2701 | |
| 242 | D | A | 0.0000 | |
| 243 | A | A | -1.6887 | |
| 244 | A | A | 0.0000 | |
| 245 | T | A | -0.8823 | |
| 246 | Y | A | 0.0000 | |
| 247 | Y | A | 0.0000 | |
| 248 | C | A | 0.0000 | |
| 249 | Q | A | 0.0000 | |
| 250 | Q | A | 0.0000 | |
| 251 | R | A | -0.0107 | |
| 252 | S | A | -0.0623 | |
| 253 | S | A | -0.1582 | |
| 254 | Y | A | 0.1052 | |
| 255 | P | A | -0.2322 | |
| 256 | L | A | 0.0000 | |
| 257 | T | A | 0.0000 | |
| 258 | F | A | 0.3512 | |
| 259 | G | A | 0.0000 | |
| 260 | A | A | -0.6468 | |
| 261 | G | A | 0.0000 | |
| 262 | T | A | 0.0000 | |
| 263 | K | A | -1.3621 | |
| 264 | L | A | 0.0000 | |
| 265 | E | A | -2.0728 | |
| 266 | L | A | -1.6850 | |
| 267 | K | A | -2.6610 | |
| 268 | R | A | -3.2923 | |
| 269 | A | A | -2.0518 | |
| 270 | A | A | -1.7104 | |
| 271 | A | A | -1.3780 | |
| 272 | E | A | -2.3343 | |
| 273 | Q | A | -2.3740 | |
| 274 | K | A | -2.1692 | |
| 275 | L | A | -0.5074 | |
| 276 | I | A | -0.0682 | |
| 277 | S | A | -1.5954 | |
| 278 | E | A | -2.5446 | |
| 279 | E | A | -2.6902 | |
| 280 | D | A | -2.2536 | |
| 281 | L | A | -0.8665 | |
| 282 | N | A | -1.8828 |