| Chain sequence(s) |
A: LPAPKNLWSRVTEDSARLSWTAPDAAFDSFWITYPEWPDPGGEAIVLTVPGSCRSYDLTGLKPGTEYFVVIYGVKGGEIYSPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.4343 | |
| 2 | P | A | 0.2137 | |
| 3 | A | A | -0.1512 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.4723 | |
| 6 | N | A | -0.3033 | |
| 7 | L | A | 0.7057 | |
| 8 | W | A | 0.1909 | |
| 9 | S | A | -0.7202 | |
| 10 | R | A | -1.8731 | |
| 11 | V | A | -1.2098 | |
| 12 | T | A | -1.6366 | |
| 13 | E | A | -2.8127 | |
| 14 | D | A | -2.7511 | |
| 15 | S | A | -2.2154 | |
| 16 | A | A | 0.0000 | |
| 17 | R | A | -2.0243 | |
| 18 | L | A | 0.0000 | |
| 19 | S | A | -0.6442 | |
| 20 | W | A | 0.0000 | |
| 21 | T | A | -0.8173 | |
| 22 | A | A | -0.6991 | |
| 23 | P | A | -0.8892 | |
| 24 | D | A | -2.0870 | |
| 25 | A | A | -1.4587 | |
| 26 | A | A | -0.9730 | |
| 27 | F | A | 0.0000 | |
| 28 | D | A | -2.8221 | |
| 29 | S | A | -1.0887 | |
| 30 | F | A | 0.0000 | |
| 31 | W | A | 1.4601 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | 1.2295 | |
| 34 | Y | A | 0.8300 | |
| 35 | P | A | -0.2749 | |
| 36 | E | A | -1.3574 | |
| 37 | W | A | -0.3838 | |
| 38 | P | A | -1.0758 | |
| 39 | D | A | -2.2148 | |
| 40 | P | A | -1.6588 | |
| 41 | G | A | -1.7107 | |
| 42 | G | A | -1.5718 | |
| 43 | E | A | -1.5184 | |
| 44 | A | A | 0.0494 | |
| 45 | I | A | 1.6154 | |
| 46 | V | A | 2.4366 | |
| 47 | L | A | 1.6988 | |
| 48 | T | A | 0.6886 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -0.7218 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.0286 | |
| 53 | C | A | -0.5597 | |
| 54 | R | A | -0.6250 | |
| 55 | S | A | -0.5674 | |
| 56 | Y | A | -0.8635 | |
| 57 | D | A | -2.1254 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.5582 | |
| 60 | G | A | -1.4844 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.9960 | |
| 63 | P | A | -2.5505 | |
| 64 | G | A | -1.8357 | |
| 65 | T | A | -1.7944 | |
| 66 | E | A | -1.1969 | |
| 67 | Y | A | 0.0000 | |
| 68 | F | A | 0.8717 | |
| 69 | V | A | 0.0000 | |
| 70 | V | A | 0.8219 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.5176 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | K | A | -2.4028 | |
| 76 | G | A | -2.0486 | |
| 77 | G | A | -1.9317 | |
| 78 | E | A | -2.1481 | |
| 79 | I | A | -0.0667 | |
| 80 | Y | A | 0.3463 | |
| 81 | S | A | 0.3795 | |
| 82 | P | A | 0.2057 | |
| 83 | L | A | -0.2469 | |
| 84 | S | A | 0.1830 | |
| 85 | A | A | 1.0972 | |
| 86 | I | A | 1.7319 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -0.7057 | |
| 89 | T | A | -1.9356 |