Project name: query_structure

Status: done

Started: 2026-03-16 20:38:48
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Chain sequence(s) A: LPAPKNLWSRVTEDSARLSWTAPDAAFDSFWITYPEWPDPGGEAIVLTVPGSCRSYDLTGLKPGTEYFVVIYGVKGGEIYSPLSAIFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-2.996
Maximal score value
2.4366
Average score
-0.5966
Total score value
-53.1015

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.4343
2 P A 0.2137
3 A A -0.1512
4 P A 0.0000
5 K A -1.4723
6 N A -0.3033
7 L A 0.7057
8 W A 0.1909
9 S A -0.7202
10 R A -1.8731
11 V A -1.2098
12 T A -1.6366
13 E A -2.8127
14 D A -2.7511
15 S A -2.2154
16 A A 0.0000
17 R A -2.0243
18 L A 0.0000
19 S A -0.6442
20 W A 0.0000
21 T A -0.8173
22 A A -0.6991
23 P A -0.8892
24 D A -2.0870
25 A A -1.4587
26 A A -0.9730
27 F A 0.0000
28 D A -2.8221
29 S A -1.0887
30 F A 0.0000
31 W A 1.4601
32 I A 0.0000
33 T A 1.2295
34 Y A 0.8300
35 P A -0.2749
36 E A -1.3574
37 W A -0.3838
38 P A -1.0758
39 D A -2.2148
40 P A -1.6588
41 G A -1.7107
42 G A -1.5718
43 E A -1.5184
44 A A 0.0494
45 I A 1.6154
46 V A 2.4366
47 L A 1.6988
48 T A 0.6886
49 V A 0.0000
50 P A -0.7218
51 G A 0.0000
52 S A -1.0286
53 C A -0.5597
54 R A -0.6250
55 S A -0.5674
56 Y A -0.8635
57 D A -2.1254
58 L A 0.0000
59 T A -1.5582
60 G A -1.4844
61 L A 0.0000
62 K A -2.9960
63 P A -2.5505
64 G A -1.8357
65 T A -1.7944
66 E A -1.1969
67 Y A 0.0000
68 F A 0.8717
69 V A 0.0000
70 V A 0.8219
71 I A 0.0000
72 Y A 0.5176
73 G A 0.0000
74 V A 0.0000
75 K A -2.4028
76 G A -2.0486
77 G A -1.9317
78 E A -2.1481
79 I A -0.0667
80 Y A 0.3463
81 S A 0.3795
82 P A 0.2057
83 L A -0.2469
84 S A 0.1830
85 A A 1.0972
86 I A 1.7319
87 F A 0.0000
88 T A -0.7057
89 T A -1.9356
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Laboratory of Theory of Biopolymers 2018