| Chain sequence(s) |
D: EVQLVESGGGLVQPGGSLRLSCAASGFTIGTDVTSMGWFRQAPGKGRELVAYITSSSTYYADSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAGVAGIFDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | D | -2.2056 | |
| 2 | V | D | -1.6888 | |
| 3 | Q | D | -1.3025 | |
| 4 | L | D | 0.0000 | |
| 5 | V | D | 1.2040 | |
| 6 | E | D | 0.0000 | |
| 7 | S | D | -0.5222 | |
| 8 | G | D | -1.0326 | |
| 9 | G | D | -0.7699 | |
| 10 | G | D | -0.0496 | |
| 11 | L | D | 0.9841 | |
| 12 | V | D | -0.1354 | |
| 13 | Q | D | -1.4787 | |
| 14 | P | D | -1.8749 | |
| 15 | G | D | -1.6143 | |
| 16 | G | D | -1.1033 | |
| 17 | S | D | -1.3914 | |
| 18 | L | D | -0.9387 | |
| 19 | R | D | -2.1352 | |
| 20 | L | D | 0.0000 | |
| 21 | S | D | -0.3209 | |
| 22 | C | D | 0.0000 | |
| 23 | A | D | -0.1706 | |
| 24 | A | D | 0.0000 | |
| 25 | S | D | -1.2140 | |
| 26 | G | D | -1.6607 | |
| 27 | F | D | 0.0000 | |
| 28 | T | D | -0.9474 | |
| 29 | I | D | 0.0000 | |
| 30 | G | D | -0.8022 | |
| 31 | T | D | -0.7695 | |
| 32 | D | D | -1.2714 | |
| 33 | V | D | 0.0000 | |
| 34 | T | D | -0.3087 | |
| 35 | S | D | 0.0000 | |
| 36 | M | D | 0.0000 | |
| 37 | G | D | 0.0000 | |
| 38 | W | D | 0.0000 | |
| 39 | F | D | -0.1223 | |
| 40 | R | D | 0.0000 | |
| 41 | Q | D | -1.7286 | |
| 42 | A | D | -1.7602 | |
| 43 | P | D | -1.3028 | |
| 44 | G | D | -1.5313 | |
| 45 | K | D | -2.5744 | |
| 46 | G | D | -2.0478 | |
| 47 | R | D | -1.9612 | |
| 48 | E | D | -1.2488 | |
| 49 | L | D | 0.0871 | |
| 50 | V | D | 0.0000 | |
| 51 | A | D | 0.0000 | |
| 52 | Y | D | 0.6489 | |
| 53 | I | D | 0.0000 | |
| 54 | T | D | -0.1064 | |
| 55 | S | D | -0.5824 | |
| 56 | S | D | -0.4398 | |
| 57 | S | D | -0.0786 | |
| 58 | T | D | 0.4332 | |
| 59 | Y | D | 0.8815 | |
| 60 | Y | D | -0.2402 | |
| 61 | A | D | -1.0009 | |
| 62 | D | D | -2.3967 | |
| 63 | S | D | -1.8218 | |
| 64 | V | D | 0.0000 | |
| 65 | K | D | -2.4922 | |
| 66 | G | D | -1.8067 | |
| 67 | R | D | -1.6373 | |
| 68 | F | D | 0.0000 | |
| 69 | T | D | -0.7213 | |
| 70 | I | D | 0.0000 | |
| 71 | S | D | -0.3750 | |
| 72 | R | D | -1.0893 | |
| 73 | D | D | -1.6390 | |
| 74 | N | D | -1.9509 | |
| 75 | A | D | -1.5799 | |
| 76 | K | D | -2.5342 | |
| 77 | R | D | -2.3314 | |
| 78 | M | D | -1.1126 | |
| 79 | V | D | 0.0000 | |
| 80 | Y | D | -0.5364 | |
| 81 | L | D | 0.0000 | |
| 82 | Q | D | -1.2863 | |
| 83 | M | D | 0.0000 | |
| 84 | N | D | -1.6802 | |
| 85 | S | D | -1.5077 | |
| 86 | L | D | 0.0000 | |
| 87 | R | D | -2.9644 | |
| 88 | A | D | -2.0438 | |
| 89 | E | D | -2.4967 | |
| 90 | D | D | 0.0000 | |
| 91 | T | D | -0.9882 | |
| 92 | A | D | 0.0000 | |
| 93 | V | D | -0.5367 | |
| 94 | Y | D | 0.0000 | |
| 95 | Y | D | -0.1528 | |
| 96 | C | D | 0.0000 | |
| 97 | A | D | 0.0000 | |
| 98 | A | D | 0.0000 | |
| 99 | G | D | 0.0000 | |
| 100 | V | D | 0.9744 | |
| 101 | A | D | 0.9518 | |
| 102 | G | D | 0.7689 | |
| 103 | I | D | 1.8149 | |
| 104 | F | D | 0.6637 | |
| 105 | D | D | -0.7349 | |
| 106 | Y | D | -0.1001 | |
| 107 | W | D | 0.0249 | |
| 108 | G | D | -0.0205 | |
| 109 | Q | D | -0.9543 | |
| 110 | G | D | -0.4343 | |
| 111 | T | D | -0.6530 | |
| 112 | Q | D | -1.1002 | |
| 113 | V | D | 0.0000 | |
| 114 | T | D | -0.3800 | |
| 115 | V | D | 0.0000 | |
| 116 | S | D | -0.8947 | |
| 117 | S | D | -0.5693 |