| Chain sequence(s) |
L: CDQSQYWDWFFVESC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 250 | C | L | 0.4119 | |
| 251 | D | L | -1.8754 | |
| 252 | Q | L | -1.5407 | |
| 253 | S | L | -0.5392 | |
| 254 | Q | L | -1.0527 | |
| 255 | Y | L | 0.7243 | |
| 256 | W | L | 0.0534 | |
| 257 | D | L | -1.5342 | |
| 258 | W | L | 1.2154 | |
| 259 | F | L | 2.5147 | |
| 260 | F | L | 2.4636 | |
| 261 | V | L | 0.9366 | |
| 262 | E | L | -1.6948 | |
| 263 | S | L | -0.4208 | |
| 264 | C | L | 0.6927 |