| Chain sequence(s) |
L: PTVPGTPAWQAE
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 322 | P | L | -0.4077 | |
| 323 | T | L | 0.2123 | |
| 324 | V | L | 1.7155 | |
| 325 | P | L | -0.0306 | |
| 326 | G | L | -0.5179 | |
| 327 | T | L | -0.0768 | |
| 328 | P | L | -0.2523 | |
| 329 | A | L | 0.1193 | |
| 330 | W | L | 0.3041 | |
| 331 | Q | L | -1.0518 | |
| 332 | A | L | -0.4756 | |
| 333 | E | L | -1.7572 |