| Chain sequence(s) |
A: PLGLRNFCFAGDDRGHTRDIADRLAAAAPELTVHRVPYSLGPDAYLQAIRDAAAAGADVVVLGGSWPSVYDEARAALDGGAKRVIGIAGPDRIEDPATRAAVDRVKRELPEFSLQFFAEEGAARDRDIDAFVAQLLAWAGRS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:07)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:07)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:07)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:07)
[INFO] Main: Simulation completed successfully. (00:03:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -0.1862 | |
| 2 | L | A | 0.8348 | |
| 3 | G | A | -0.3227 | |
| 4 | L | A | 0.0000 | |
| 5 | R | A | -2.0985 | |
| 6 | N | A | -1.3977 | |
| 7 | F | A | 0.0000 | |
| 8 | C | A | 0.0000 | |
| 9 | F | A | 0.0000 | |
| 10 | A | A | 0.0000 | |
| 11 | G | A | -0.6504 | |
| 12 | D | A | 0.0000 | |
| 13 | D | A | -2.1910 | |
| 14 | R | A | -2.7059 | |
| 15 | G | A | -2.0465 | |
| 16 | H | A | -1.6795 | |
| 17 | T | A | 0.0000 | |
| 18 | R | A | -2.7228 | |
| 19 | D | A | -2.3725 | |
| 20 | I | A | 0.0000 | |
| 21 | A | A | 0.0000 | |
| 22 | D | A | -2.2125 | |
| 23 | R | A | -2.6551 | |
| 24 | L | A | 0.0000 | |
| 25 | A | A | -1.2116 | |
| 26 | A | A | -1.1025 | |
| 27 | A | A | -0.9928 | |
| 28 | A | A | 0.0000 | |
| 29 | P | A | -1.3061 | |
| 30 | E | A | -2.0556 | |
| 31 | L | A | -1.3789 | |
| 32 | T | A | -0.7868 | |
| 33 | V | A | -0.7471 | |
| 34 | H | A | -0.9158 | |
| 35 | R | A | -1.4340 | |
| 36 | V | A | 0.0000 | |
| 37 | P | A | -0.2565 | |
| 38 | Y | A | 0.7724 | |
| 39 | S | A | 0.5029 | |
| 40 | L | A | 0.4622 | |
| 41 | G | A | -0.3017 | |
| 42 | P | A | -0.9027 | |
| 43 | D | A | -1.8773 | |
| 44 | A | A | -0.9539 | |
| 45 | Y | A | -0.3911 | |
| 46 | L | A | -1.1569 | |
| 47 | Q | A | -1.5719 | |
| 48 | A | A | -1.3397 | |
| 49 | I | A | 0.0000 | |
| 50 | R | A | -2.0205 | |
| 51 | D | A | -2.0745 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | A | A | -1.1164 | |
| 55 | A | A | -0.7187 | |
| 56 | G | A | -0.7987 | |
| 57 | A | A | 0.0000 | |
| 58 | D | A | -1.4529 | |
| 59 | V | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | V | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | G | A | 0.0262 | |
| 64 | G | A | 0.0000 | |
| 65 | S | A | -0.7821 | |
| 66 | W | A | 0.5180 | |
| 67 | P | A | -0.2508 | |
| 68 | S | A | -0.3434 | |
| 69 | V | A | 0.0000 | |
| 70 | Y | A | -1.4490 | |
| 71 | D | A | -1.9651 | |
| 72 | E | A | 0.0000 | |
| 73 | A | A | 0.0000 | |
| 74 | R | A | -1.9781 | |
| 75 | A | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | L | A | -2.0203 | |
| 78 | D | A | -2.4960 | |
| 79 | G | A | -2.0442 | |
| 80 | G | A | -1.7652 | |
| 81 | A | A | -1.8214 | |
| 82 | K | A | -2.2076 | |
| 83 | R | A | -1.9736 | |
| 84 | V | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | A | A | 0.0000 | |
| 89 | G | A | 0.0000 | |
| 90 | P | A | -1.6661 | |
| 91 | D | A | -3.4819 | |
| 92 | R | A | -3.2038 | |
| 93 | I | A | 0.0000 | |
| 94 | E | A | -4.0578 | |
| 95 | D | A | -3.4604 | |
| 96 | P | A | -1.8815 | |
| 97 | A | A | -1.0216 | |
| 98 | T | A | 0.0000 | |
| 99 | R | A | -2.5801 | |
| 100 | A | A | -1.6767 | |
| 101 | A | A | 0.0000 | |
| 102 | V | A | 0.0000 | |
| 103 | D | A | -2.7114 | |
| 104 | R | A | -3.5676 | |
| 105 | V | A | 0.0000 | |
| 106 | K | A | -3.8427 | |
| 107 | R | A | -3.9916 | |
| 108 | E | A | -3.3319 | |
| 109 | L | A | 0.0000 | |
| 110 | P | A | -2.0710 | |
| 111 | E | A | -2.1993 | |
| 112 | F | A | 0.0000 | |
| 113 | S | A | -0.9155 | |
| 114 | L | A | -0.0618 | |
| 115 | Q | A | -0.0401 | |
| 116 | F | A | 0.1236 | |
| 117 | F | A | 0.0000 | |
| 118 | A | A | -1.7977 | |
| 119 | E | A | -2.6247 | |
| 120 | E | A | -3.0740 | |
| 121 | G | A | -2.2934 | |
| 122 | A | A | -1.9085 | |
| 123 | A | A | -2.2864 | |
| 124 | R | A | -3.0802 | |
| 125 | D | A | -3.5789 | |
| 126 | R | A | -3.1308 | |
| 127 | D | A | -2.0441 | |
| 128 | I | A | 0.0000 | |
| 129 | D | A | -2.3644 | |
| 130 | A | A | -1.4190 | |
| 131 | F | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | A | A | -0.9068 | |
| 134 | Q | A | -1.0703 | |
| 135 | L | A | 0.0000 | |
| 136 | L | A | 0.0000 | |
| 137 | A | A | -0.7522 | |
| 138 | W | A | -0.3647 | |
| 139 | A | A | 0.0000 | |
| 140 | G | A | -1.1443 | |
| 141 | R | A | -1.4471 | |
| 142 | S | A | -0.8018 |