| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMAWFRQAPGKGRELVAAISSSGGYTYYADSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAARSGGLTKESAFDESKYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1290 | |
| 2 | V | A | -1.1540 | |
| 3 | Q | A | -1.3339 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.8330 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.4523 | |
| 8 | G | A | -0.9612 | |
| 9 | G | A | -0.7410 | |
| 10 | G | A | 0.0973 | |
| 11 | L | A | 0.8994 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3830 | |
| 14 | P | A | -1.5188 | |
| 15 | G | A | -1.3373 | |
| 16 | G | A | -0.9195 | |
| 17 | S | A | -1.3143 | |
| 18 | L | A | -1.0166 | |
| 19 | R | A | -2.2643 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4465 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1383 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9032 | |
| 26 | G | A | -1.2794 | |
| 27 | F | A | -0.5628 | |
| 28 | T | A | -0.2677 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.6309 | |
| 31 | S | A | -0.4610 | |
| 32 | Y | A | -0.4891 | |
| 33 | A | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.6655 | |
| 40 | A | A | -1.6535 | |
| 41 | P | A | -1.1710 | |
| 42 | G | A | -1.6538 | |
| 43 | K | A | -2.6688 | |
| 44 | G | A | -2.1829 | |
| 45 | R | A | -2.1301 | |
| 46 | E | A | -2.0013 | |
| 47 | L | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | S | A | -0.4509 | |
| 54 | S | A | -0.4793 | |
| 55 | G | A | -0.3944 | |
| 56 | G | A | -0.0203 | |
| 57 | Y | A | 0.7562 | |
| 58 | T | A | 0.3359 | |
| 59 | Y | A | -0.3079 | |
| 60 | Y | A | -0.8032 | |
| 61 | A | A | 0.0000 | |
| 62 | D | A | -2.3878 | |
| 63 | S | A | -1.7382 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5514 | |
| 66 | G | A | -1.7343 | |
| 67 | R | A | -1.3795 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9599 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5410 | |
| 72 | R | A | -1.0466 | |
| 73 | D | A | -1.6363 | |
| 74 | N | A | -1.6474 | |
| 75 | A | A | -1.3750 | |
| 76 | K | A | -2.2701 | |
| 77 | R | A | -1.7553 | |
| 78 | M | A | -0.9057 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6859 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6527 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.3967 | |
| 85 | S | A | -1.0960 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.1108 | |
| 88 | A | A | -1.6761 | |
| 89 | E | A | -2.1835 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8308 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.3048 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.2070 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | R | A | -1.2887 | |
| 100 | S | A | -1.0379 | |
| 101 | G | A | -0.9435 | |
| 102 | G | A | -0.6375 | |
| 103 | L | A | 0.0000 | |
| 104 | T | A | -1.2696 | |
| 105 | K | A | -2.1709 | |
| 106 | E | A | -2.3948 | |
| 107 | S | A | -1.8223 | |
| 108 | A | A | 0.0000 | |
| 109 | F | A | -0.5815 | |
| 110 | D | A | -1.5611 | |
| 111 | E | A | -1.6953 | |
| 112 | S | A | -1.4869 | |
| 113 | K | A | -2.0843 | |
| 114 | Y | A | 0.0000 | |
| 115 | D | A | -1.8942 | |
| 116 | Y | A | -0.6434 | |
| 117 | W | A | -0.2272 | |
| 118 | G | A | -0.1750 | |
| 119 | Q | A | -0.8895 | |
| 120 | G | A | 0.0000 | |
| 121 | T | A | -0.6280 | |
| 122 | Q | A | -0.9149 | |
| 123 | V | A | 0.0000 | |
| 124 | T | A | -0.3114 | |
| 125 | V | A | 0.0000 | |
| 126 | S | A | -0.8174 | |
| 127 | S | A | -0.5773 |