| Chain sequence(s) |
A: AGETCVGGTCNTPGATCSWPVCTRNGLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0528 | |
| 2 | G | A | -0.2896 | |
| 3 | E | A | 0.0000 | |
| 4 | T | A | 0.6912 | |
| 5 | C | A | 0.0000 | |
| 6 | V | A | 1.8802 | |
| 7 | G | A | 0.4358 | |
| 8 | G | A | 0.2731 | |
| 9 | T | A | -0.0519 | |
| 10 | C | A | -0.3790 | |
| 11 | N | A | -1.3578 | |
| 12 | T | A | -0.9644 | |
| 13 | P | A | -0.9409 | |
| 14 | G | A | -1.0807 | |
| 15 | A | A | -0.8286 | |
| 16 | T | A | -0.2528 | |
| 17 | C | A | 0.7575 | |
| 18 | S | A | 0.9673 | |
| 19 | W | A | 1.7982 | |
| 20 | P | A | 1.5440 | |
| 21 | V | A | 1.4609 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.2016 | |
| 24 | R | A | -1.4824 | |
| 25 | N | A | -1.6329 | |
| 26 | G | A | -0.7577 | |
| 27 | L | A | 0.4465 | |
| 28 | P | A | 0.0978 | |
| 29 | V | A | -0.0868 |