Project name: gal10_6H

Status: done

Started: 2025-02-28 01:27:28
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Chain sequence(s) A: MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRRVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFNVSYLKRGGGGSHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:22)
Show buried residues

Minimal score value
-3.6013
Maximal score value
1.5938
Average score
-0.8111
Total score value
-124.0969

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.1795
2 S A 0.9126
3 L A 1.5748
4 L A 0.7964
5 P A 0.5215
6 V A 0.3086
7 P A -0.1850
8 Y A -0.0154
9 T A -0.0519
10 E A -0.6155
11 A A -0.5627
12 A A 0.0000
13 S A -0.6489
14 L A 0.0000
15 S A -0.1568
16 T A -0.6060
17 G A 0.2067
18 S A 0.0000
19 T A 0.3840
20 V A 0.0000
21 T A -0.8597
22 I A 0.0000
23 K A -2.2261
24 G A 0.0000
25 R A -2.7689
26 P A 0.0000
27 L A 0.5732
28 A A 0.8396
29 C A 1.5938
30 F A 1.5398
31 L A 1.2499
32 N A -0.6613
33 E A -1.3522
34 P A 0.0000
35 Y A 0.0000
36 L A 0.0000
37 Q A -0.5700
38 V A 0.0000
39 D A 0.0000
40 F A 0.0000
41 H A 0.0000
42 T A -1.6025
43 E A -2.3457
44 M A -1.3717
45 K A -2.8179
46 E A -3.3951
47 E A -3.2756
48 S A 0.0000
49 D A -1.2705
50 I A 0.0000
51 V A 0.0000
52 F A 0.0000
53 H A 0.0000
54 F A 0.0000
55 Q A -0.5789
56 V A 0.0000
57 C A 0.0000
58 F A 0.0000
59 G A -1.9791
60 R A -2.9224
61 R A -2.9734
62 V A 0.0000
63 V A 0.0000
64 M A 0.0000
65 N A 0.0000
66 S A 0.0000
67 R A -0.4881
68 E A -0.3374
69 Y A 0.5887
70 G A -0.3696
71 A A 0.2334
72 W A 0.2990
73 K A -0.9685
74 Q A -1.6668
75 Q A -1.5096
76 V A -0.9531
77 E A -2.5654
78 S A -2.3560
79 K A -3.3582
80 N A -2.6004
81 M A -1.7859
82 P A -1.2443
83 F A 0.0000
84 Q A -2.4149
85 D A -1.9557
86 G A -1.8489
87 Q A -3.0281
88 E A -3.6013
89 F A 0.0000
90 E A -2.3971
91 L A 0.0000
92 S A -0.8360
93 I A 0.0000
94 S A -0.0796
95 V A 0.0000
96 L A -0.9703
97 P A -1.6568
98 D A -3.1111
99 K A -2.8745
100 Y A 0.0000
101 Q A -0.8351
102 V A 0.0000
103 M A -0.9954
104 V A 0.0000
105 N A -2.4085
106 G A -1.7951
107 Q A -1.9028
108 S A -1.0279
109 S A -0.7975
110 Y A -0.2848
111 T A -0.8827
112 F A 0.0000
113 D A -2.9074
114 H A -2.5134
115 R A -1.8442
116 I A -1.6188
117 K A -2.3856
118 P A 0.0000
119 E A -1.6163
120 A A -1.4850
121 V A 0.0000
122 K A -1.7718
123 M A 0.0000
124 V A 0.0000
125 Q A -0.0934
126 V A 0.0000
127 W A -0.4726
128 R A -1.0235
129 D A 0.0000
130 I A 0.0000
131 S A -0.6118
132 L A 0.0000
133 T A -0.4392
134 K A -1.4742
135 F A 0.0000
136 N A -1.4422
137 V A -0.1369
138 S A 0.4242
139 Y A 1.2905
140 L A 0.7930
141 K A -1.6024
142 R A -2.2939
143 G A -1.9358
144 G A -1.8641
145 G A -1.4430
146 G A -1.3592
147 S A -1.4476
148 H A -2.1211
149 H A -2.4407
150 H A -2.6138
151 H A -2.5729
152 H A -2.3379
153 H A -1.8168
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Laboratory of Theory of Biopolymers 2018