| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPEKDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPQHPGADDRVAFSYDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPDGHPLPDAPPPSPLYVPPPPTSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPVPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9498 | |
| 2 | L | A | 1.9732 | |
| 3 | P | A | 0.6500 | |
| 4 | P | A | 0.3487 | |
| 5 | T | A | 0.1089 | |
| 6 | T | A | 0.1220 | |
| 7 | P | A | 0.1672 | |
| 8 | V | A | 1.2236 | |
| 9 | A | A | 0.0306 | |
| 10 | K | A | -1.1685 | |
| 11 | V | A | -0.4209 | |
| 12 | Q | A | -1.5430 | |
| 13 | S | A | -1.6113 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4206 | |
| 16 | E | A | -2.4419 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4555 | |
| 20 | P | A | 0.1076 | |
| 21 | T | A | 0.1167 | |
| 22 | S | A | -0.1675 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0904 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2783 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8762 | |
| 31 | R | A | -2.6486 | |
| 32 | L | A | -0.7745 | |
| 33 | L | A | 1.2308 | |
| 34 | T | A | 1.6672 | |
| 35 | V | A | 2.0396 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.3300 | |
| 38 | P | A | 0.0000 | |
| 39 | E | A | -1.2578 | |
| 40 | K | A | -1.8301 | |
| 41 | D | A | -0.7838 | |
| 42 | I | A | 0.9719 | |
| 43 | I | A | 1.2980 | |
| 44 | K | A | -1.0532 | |
| 45 | N | A | -1.8741 | |
| 46 | G | A | -1.1705 | |
| 47 | K | A | -0.8424 | |
| 48 | V | A | 1.6478 | |
| 49 | V | A | 2.1688 | |
| 50 | V | A | 1.4135 | |
| 51 | P | A | 0.5453 | |
| 52 | K | A | -0.6859 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1329 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4874 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3032 | |
| 70 | K | A | -1.8173 | |
| 71 | F | A | -0.6793 | |
| 72 | A | A | -0.5904 | |
| 73 | L | A | -0.8811 | |
| 74 | P | A | -1.2710 | |
| 75 | Q | A | -2.4797 | |
| 76 | K | A | -3.0947 | |
| 77 | D | A | -2.9891 | |
| 78 | F | A | -1.6419 | |
| 79 | Y | A | -1.9145 | |
| 80 | D | A | -2.7490 | |
| 81 | P | A | -2.3483 | |
| 82 | E | A | -3.0667 | |
| 83 | K | A | -3.4373 | |
| 84 | E | A | -2.4985 | |
| 85 | R | A | -1.3099 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6457 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9650 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3221 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6715 | |
| 99 | G | A | -0.5279 | |
| 100 | P | A | -0.3970 | |
| 101 | L | A | 0.0496 | |
| 102 | G | A | -0.1940 | |
| 103 | K | A | -0.6363 | |
| 104 | G | A | -0.5682 | |
| 105 | S | A | -0.6122 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0153 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3800 | |
| 110 | L | A | 0.2797 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1349 | |
| 113 | K | A | -0.4589 | |
| 114 | L | A | -0.9420 | |
| 115 | G | A | -0.8133 | |
| 116 | D | A | -1.3632 | |
| 117 | T | A | -1.2604 | |
| 118 | E | A | -2.6533 | |
| 119 | N | A | -2.3738 | |
| 120 | P | A | -1.6275 | |
| 121 | T | A | -0.8310 | |
| 122 | A | A | -0.5121 | |
| 123 | P | A | -0.1748 | |
| 124 | Q | A | -0.5848 | |
| 125 | H | A | -0.7709 | |
| 126 | P | A | -1.1681 | |
| 127 | G | A | -1.4566 | |
| 128 | A | A | -1.2697 | |
| 129 | D | A | -2.2377 | |
| 130 | D | A | -1.7404 | |
| 131 | R | A | -1.1584 | |
| 132 | V | A | 0.2210 | |
| 133 | A | A | 0.4268 | |
| 134 | F | A | 0.2701 | |
| 135 | S | A | -0.1328 | |
| 136 | Y | A | 0.0000 | |
| 137 | D | A | -0.7675 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5611 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2658 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0867 | |
| 157 | D | A | 0.2674 | |
| 158 | I | A | 0.8287 | |
| 159 | A | A | 0.0986 | |
| 160 | E | A | -1.4986 | |
| 161 | P | A | -0.3254 | |
| 162 | C | A | 0.1169 | |
| 163 | P | A | -0.2285 | |
| 164 | G | A | -0.1690 | |
| 165 | L | A | 0.4083 | |
| 166 | P | A | -0.1982 | |
| 167 | P | A | -0.3831 | |
| 168 | G | A | -0.4393 | |
| 169 | A | A | -0.0530 | |
| 170 | C | A | 0.7242 | |
| 171 | P | A | 0.5028 | |
| 172 | P | A | 0.6737 | |
| 173 | I | A | 2.0195 | |
| 174 | Q | A | 0.8249 | |
| 175 | L | A | 1.4140 | |
| 176 | V | A | 0.8008 | |
| 177 | N | A | -0.3671 | |
| 178 | S | A | -0.0021 | |
| 179 | V | A | 0.3969 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3699 | |
| 182 | D | A | 0.0768 | |
| 183 | G | A | -0.1576 | |
| 184 | D | A | -0.5977 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4673 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1235 | |
| 190 | F | A | 0.0427 | |
| 191 | G | A | -0.1251 | |
| 192 | N | A | -0.3364 | |
| 193 | M | A | -0.1933 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4158 | |
| 197 | E | A | -2.6179 | |
| 198 | L | A | -1.2192 | |
| 199 | Q | A | -2.5316 | |
| 200 | Q | A | -3.3439 | |
| 201 | D | A | -3.6044 | |
| 202 | R | A | -3.3643 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | -0.1501 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.5108 | |
| 211 | S | A | -1.9540 | |
| 212 | T | A | -1.5130 | |
| 213 | R | A | -2.2280 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2214 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3019 | |
| 220 | L | A | 0.4839 | |
| 221 | K | A | -1.3414 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9016 | |
| 224 | N | A | -1.5904 | |
| 225 | E | A | -1.3370 | |
| 226 | A | A | -0.6784 | |
| 227 | Y | A | -0.4137 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7052 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0912 | |
| 234 | F | A | 0.2728 | |
| 235 | G | A | -0.8304 | |
| 236 | R | A | -2.6405 | |
| 237 | R | A | -2.9726 | |
| 238 | E | A | -2.1485 | |
| 239 | Q | A | -0.1604 | |
| 240 | V | A | 1.5163 | |
| 241 | Y | A | 1.2315 | |
| 242 | A | A | 0.1669 | |
| 243 | R | A | -1.3296 | |
| 244 | H | A | -1.1594 | |
| 245 | F | A | -0.1862 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7520 | |
| 249 | S | A | -1.1967 | |
| 250 | G | A | -1.1217 | |
| 251 | P | A | -1.0289 | |
| 252 | D | A | -1.4099 | |
| 253 | G | A | -1.3066 | |
| 254 | H | A | -1.4808 | |
| 255 | P | A | -1.3870 | |
| 256 | L | A | -0.4085 | |
| 257 | P | A | -0.8515 | |
| 258 | D | A | -1.7338 | |
| 259 | A | A | -0.4479 | |
| 260 | P | A | -0.6928 | |
| 261 | P | A | -0.2147 | |
| 262 | P | A | 0.0292 | |
| 263 | S | A | 0.2622 | |
| 264 | P | A | 0.7094 | |
| 265 | L | A | 1.6987 | |
| 266 | Y | A | 1.5303 | |
| 267 | V | A | 1.9191 | |
| 268 | P | A | 0.5325 | |
| 269 | P | A | 0.4432 | |
| 270 | P | A | -0.1343 | |
| 271 | P | A | -0.0840 | |
| 272 | T | A | -0.0049 | |
| 273 | S | A | 0.2856 | |
| 274 | P | A | 0.3149 | |
| 275 | Y | A | 1.0343 | |
| 276 | A | A | 0.8546 | |
| 277 | V | A | 1.3711 | |
| 278 | R | A | -0.0174 | |
| 279 | P | A | -0.4483 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.6969 | |
| 282 | D | A | -1.0520 | |
| 283 | Y | A | 0.8025 | |
| 284 | F | A | 0.6984 | |
| 285 | G | A | 0.1392 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9447 | |
| 291 | L | A | 1.6545 | |
| 292 | V | A | 0.6705 | |
| 293 | S | A | -0.1653 | |
| 294 | S | A | -0.9929 | |
| 295 | D | A | -1.8760 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0587 | |
| 298 | L | A | -1.2018 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6612 | |
| 301 | R | A | -1.9171 | |
| 302 | P | A | -0.9703 | |
| 303 | F | A | -0.1621 | |
| 304 | W | A | -0.5237 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0834 | |
| 307 | R | A | -2.8320 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2560 | |
| 310 | G | A | -1.2220 | |
| 311 | N | A | -1.3110 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9379 | |
| 319 | N | A | -0.9017 | |
| 320 | E | A | -1.0589 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3231 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1650 | |
| 333 | N | A | 0.3997 | |
| 334 | F | A | 1.4888 | |
| 335 | T | A | 0.7604 | |
| 336 | I | A | 0.4052 | |
| 337 | S | A | -0.9849 | |
| 338 | Q | A | -1.7683 | |
| 339 | Q | A | -1.2016 | |
| 340 | L | A | 0.6864 | |
| 341 | C | A | 0.5625 | |
| 342 | T | A | 0.3806 | |
| 343 | P | A | 0.1264 | |
| 344 | V | A | 0.9715 | |
| 345 | P | A | 0.4933 | |
| 346 | N | A | -0.0361 | |
| 347 | V | A | 1.6878 | |
| 348 | Y | A | 1.5811 | |
| 349 | D | A | 0.2140 | |
| 350 | P | A | -0.3886 | |
| 351 | S | A | -0.3416 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7441 | |
| 354 | K | A | -1.8448 | |
| 355 | N | A | -1.7724 | |
| 356 | Y | A | -0.0906 | |
| 357 | L | A | 0.5272 | |
| 358 | R | A | 0.8656 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4920 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0077 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9336 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6604 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3057 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3212 | |
| 376 | L | A | -1.7510 | |
| 377 | D | A | -2.0316 | |
| 378 | P | A | -1.0630 | |
| 379 | G | A | -1.0234 | |
| 380 | V | A | -0.9348 | |
| 381 | L | A | -0.5479 | |
| 382 | A | A | -0.6677 | |
| 383 | H | A | -0.8558 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4181 | |
| 386 | T | A | -0.5848 | |
| 387 | M | A | -0.3402 | |
| 388 | N | A | -0.8728 | |
| 389 | P | A | -1.2817 | |
| 390 | T | A | -1.5640 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5520 | |
| 393 | E | A | -2.9530 | |
| 394 | N | A | -2.7165 | |
| 395 | W | A | -1.5482 | |
| 396 | N | A | -1.3857 | |
| 397 | L | A | -0.2219 | |
| 398 | G | A | 0.5283 | |
| 399 | F | A | 2.4202 | |
| 400 | V | A | 1.8439 | |
| 401 | P | A | 0.0464 | |
| 402 | P | A | -1.9466 | |
| 403 | K | A | -3.5648 | |
| 404 | E | A | -3.9497 | |
| 405 | R | A | -4.3187 | |
| 406 | E | A | -3.9457 | |
| 407 | D | A | -2.9295 | |
| 408 | P | A | -1.7962 | |
| 409 | Y | A | -0.9837 | |
| 410 | K | A | -2.0984 | |
| 411 | G | A | -0.6346 | |
| 412 | L | A | 0.6630 | |
| 413 | I | A | 1.5817 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3836 | |
| 416 | E | A | -1.6473 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9331 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0765 | |
| 421 | E | A | -2.8025 | |
| 422 | R | A | -2.6758 | |
| 423 | F | A | -1.3127 | |
| 424 | S | A | -1.4637 | |
| 425 | Q | A | -1.8866 | |
| 426 | D | A | -2.8643 | |
| 427 | L | A | -1.9490 | |
| 428 | D | A | -2.7199 | |
| 429 | Q | A | -2.5789 | |
| 430 | F | A | -1.3993 | |
| 431 | A | A | -0.8680 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5055 | |
| 435 | K | A | -0.6723 | |
| 436 | F | A | 0.1859 | |
| 437 | L | A | 1.0611 | |
| 438 | Y | A | 0.8509 | |
| 439 | Q | A | -0.2531 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine