Chain sequence(s) |
A: IQKVQDDTKTLIKTIVTRINDILDFIPGLHPILTLSKMDQTLAVYQQILTSMPSRNVIQISNDLENLRDLLHVLAFSKSCHLPEASGLETLDSLGGVLEASGYSTEVVALSRLQGSLQDMLWQLDLSPGC
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | KV5A,VY6A |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.0351 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:01:20) [INFO] FoldX: Starting FoldX energy minimalization (00:01:45) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09) [INFO] Main: Simulation completed successfully. (00:02:10) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
3 | I | A | 0.9446 | |
4 | Q | A | -0.6922 | |
5 | V | A | 1.4121 | mutated: KV5A |
6 | Y | A | 0.7900 | mutated: VY6A |
7 | Q | A | -0.6521 | |
8 | D | A | -1.9605 | |
9 | D | A | -2.1200 | |
10 | T | A | 0.0000 | |
11 | K | A | -0.6191 | |
12 | T | A | -0.1459 | |
13 | L | A | 0.1898 | |
14 | I | A | 0.0000 | |
15 | K | A | -1.4662 | |
16 | T | A | -0.2966 | |
17 | I | A | 0.0000 | |
18 | V | A | 0.1788 | |
19 | T | A | -0.1159 | |
20 | R | A | -0.4970 | |
21 | I | A | 0.0000 | |
22 | N | A | -1.6096 | |
23 | D | A | -1.6579 | |
24 | I | A | 1.6828 | |
39 | L | A | 0.5789 | |
40 | D | A | -1.2592 | |
41 | F | A | 1.6552 | |
42 | I | A | 0.5878 | |
43 | P | A | -0.2169 | |
44 | G | A | -0.1449 | |
45 | L | A | 0.0000 | |
46 | H | A | -0.9957 | |
47 | P | A | 0.0620 | |
48 | I | A | 1.6195 | |
49 | L | A | 1.1390 | |
50 | T | A | 0.1251 | |
51 | L | A | 0.0000 | |
52 | S | A | -0.1904 | |
53 | K | A | -0.9566 | |
54 | M | A | 0.0000 | |
55 | D | A | 0.0000 | |
56 | Q | A | -0.3299 | |
57 | T | A | 0.0000 | |
58 | L | A | 0.0000 | |
59 | A | A | 0.0065 | |
60 | V | A | 0.0000 | |
61 | Y | A | 0.0000 | |
62 | Q | A | -0.1756 | |
63 | Q | A | -0.3390 | |
64 | I | A | 0.0000 | |
65 | L | A | 0.0000 | |
66 | T | A | -0.1098 | |
67 | S | A | -0.2043 | |
68 | M | A | 0.0315 | |
69 | P | A | -0.2637 | |
70 | S | A | -0.5506 | |
71 | R | A | -1.9079 | |
72 | N | A | -0.5861 | |
73 | V | A | 0.0000 | |
74 | I | A | 1.2697 | |
75 | Q | A | -0.3204 | |
76 | I | A | 0.0000 | |
77 | S | A | -0.1195 | |
78 | N | A | -1.2771 | |
79 | D | A | 0.0000 | |
80 | L | A | 0.0000 | |
81 | E | A | -2.0533 | |
82 | N | A | -1.6067 | |
83 | L | A | 0.0000 | |
84 | R | A | -0.6981 | |
85 | D | A | -1.8197 | |
86 | L | A | -0.1246 | |
87 | L | A | 0.0000 | |
88 | H | A | -0.3930 | |
89 | V | A | 0.4944 | |
90 | L | A | 0.0000 | |
91 | A | A | 0.0000 | |
92 | F | A | 1.9398 | |
93 | S | A | 0.1604 | |
94 | K | A | -0.5709 | |
95 | S | A | -0.0777 | |
96 | C | A | -0.0603 | |
97 | H | A | -0.9280 | |
98 | L | A | -0.0555 | |
99 | P | A | -0.5629 | |
100 | E | A | -1.8644 | |
101 | A | A | -0.3548 | |
102 | S | A | -0.2969 | |
103 | G | A | -0.4289 | |
104 | L | A | -0.0173 | |
105 | E | A | -1.7489 | |
106 | T | A | -0.3017 | |
107 | L | A | 0.0267 | |
108 | D | A | -1.7620 | |
109 | S | A | -0.5411 | |
110 | L | A | 0.0000 | |
111 | G | A | -0.3253 | |
112 | G | A | -0.4196 | |
113 | V | A | 0.4147 | |
114 | L | A | 0.0000 | |
115 | E | A | -1.8170 | |
116 | A | A | -0.3612 | |
117 | S | A | -0.2956 | |
118 | G | A | -0.3191 | |
119 | Y | A | 0.9053 | |
120 | S | A | 0.0571 | |
121 | T | A | -0.3332 | |
122 | E | A | -1.3754 | |
123 | V | A | 0.4199 | |
124 | V | A | 0.0000 | |
125 | A | A | 0.0000 | |
126 | L | A | 0.0000 | |
127 | S | A | -0.0610 | |
128 | R | A | -0.2310 | |
129 | L | A | 0.0000 | |
130 | Q | A | -0.2796 | |
131 | G | A | -0.2139 | |
132 | S | A | 0.0000 | |
133 | L | A | 0.0000 | |
134 | Q | A | -1.1679 | |
135 | D | A | -0.6128 | |
136 | M | A | 0.0000 | |
137 | L | A | 0.3109 | |
138 | W | A | 1.2193 | |
139 | Q | A | 0.0000 | |
140 | L | A | 0.0000 | |
141 | D | A | -1.5009 | |
142 | L | A | 1.1754 | |
143 | S | A | 0.0690 | |
144 | P | A | 0.0000 | |
145 | G | A | -0.3295 | |
146 | C | A | 0.2084 |