| Chain sequence(s) |
B: EAAAAAEAAAAAAAAAAAAAAAAAAAALRKKKAEEEKEEAKRIGEL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -1.7448 | |
| 2 | A | B | -1.0168 | |
| 3 | A | B | -0.9678 | |
| 4 | A | B | -1.0430 | |
| 5 | A | B | -0.7383 | |
| 6 | A | B | -0.8770 | |
| 7 | E | B | -1.6176 | |
| 8 | A | B | -0.6531 | |
| 9 | A | B | -0.3730 | |
| 10 | A | B | -0.4803 | |
| 11 | A | B | -0.3622 | |
| 12 | A | B | -0.0660 | |
| 13 | A | B | 0.0196 | |
| 14 | A | B | 0.0511 | |
| 15 | A | B | 0.2620 | |
| 16 | A | B | 0.2592 | |
| 17 | A | B | 0.2637 | |
| 18 | A | B | 0.2585 | |
| 19 | A | B | 0.2530 | |
| 20 | A | B | 0.2551 | |
| 21 | A | B | 0.2383 | |
| 22 | A | B | 0.3493 | |
| 23 | A | B | -0.0010 | |
| 24 | A | B | 0.0378 | |
| 25 | A | B | -0.4036 | |
| 26 | A | B | -1.0668 | |
| 27 | A | B | -1.2406 | |
| 28 | L | B | -1.4483 | |
| 29 | R | B | -3.7687 | |
| 30 | K | B | -4.6003 | |
| 31 | K | B | -4.9793 | |
| 32 | K | B | -5.3965 | |
| 33 | A | B | -5.1597 | |
| 34 | E | B | -6.4240 | |
| 35 | E | B | -6.7282 | |
| 36 | E | B | -6.4544 | |
| 37 | K | B | -6.2471 | |
| 38 | E | B | -6.0040 | |
| 39 | E | B | -5.5575 | |
| 40 | A | B | -3.7853 | |
| 41 | K | B | -4.6511 | |
| 42 | R | B | -3.5799 | |
| 43 | I | B | -0.7395 | |
| 44 | G | B | -1.7395 | |
| 45 | E | B | -2.1474 | |
| 46 | L | B | 0.4782 |