Project name: fold_rfinf_11_22024_10_30_13_28_model_0

Status: done

Started: 2026-03-26 12:01:06
Settings
Chain sequence(s) B: EAAAAAEAAAAAAAAAAAAAAAAAAAALRKKKAEEEKEEAKRIGEL
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:28)
Show buried residues

Minimal score value
-6.7282
Maximal score value
0.4782
Average score
-1.9421
Total score value
-89.3368

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E B -1.7448
2 A B -1.0168
3 A B -0.9678
4 A B -1.0430
5 A B -0.7383
6 A B -0.8770
7 E B -1.6176
8 A B -0.6531
9 A B -0.3730
10 A B -0.4803
11 A B -0.3622
12 A B -0.0660
13 A B 0.0196
14 A B 0.0511
15 A B 0.2620
16 A B 0.2592
17 A B 0.2637
18 A B 0.2585
19 A B 0.2530
20 A B 0.2551
21 A B 0.2383
22 A B 0.3493
23 A B -0.0010
24 A B 0.0378
25 A B -0.4036
26 A B -1.0668
27 A B -1.2406
28 L B -1.4483
29 R B -3.7687
30 K B -4.6003
31 K B -4.9793
32 K B -5.3965
33 A B -5.1597
34 E B -6.4240
35 E B -6.7282
36 E B -6.4544
37 K B -6.2471
38 E B -6.0040
39 E B -5.5575
40 A B -3.7853
41 K B -4.6511
42 R B -3.5799
43 I B -0.7395
44 G B -1.7395
45 E B -2.1474
46 L B 0.4782
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Laboratory of Theory of Biopolymers 2018