Project name: 12_i14e7_x4e7_x11e6_i20e6

Status: done

Started: 2025-08-11 19:09:17
Settings
Chain sequence(s) A: AAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:59)
Show buried residues

Minimal score value
-4.4816
Maximal score value
3.6252
Average score
-0.2498
Total score value
-64.7108

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2668
2 A A -0.0056
3 Y A 0.4056
4 R A -0.8656
5 A A -0.0518
6 H A 0.5511
7 Y A 1.6003
8 N A 1.2411
9 I A 3.1646
10 V A 3.1212
11 T A 2.7924
12 F A 3.5929
13 A A 2.6218
14 A A 2.1635
15 Y A 2.5072
16 T A 1.9817
17 L A 2.3892
18 Q A 1.0685
19 D A 0.5136
20 I A 2.7154
21 V A 2.9377
22 L A 2.4043
23 H A 1.6856
24 L A 2.9819
25 A A 2.6251
26 A A 2.5719
27 Y A 3.2676
28 L A 3.1948
29 L A 3.2085
30 M A 3.2922
31 G A 2.4327
32 T A 2.7240
33 L A 3.4639
34 G A 2.4372
35 I A 3.6252
36 V A 3.5793
37 A A 2.3229
38 A A 2.2055
39 Y A 2.2430
40 L A 1.2121
41 P A -0.3502
42 A A -1.0032
43 R A -2.6548
44 R A -2.9957
45 A A -2.4198
46 E A -3.2170
47 P A -1.9830
48 Q A -1.2776
49 A A 0.0960
50 A A 1.0591
51 Y A 2.2342
52 L A 2.4400
53 L A 2.1284
54 C A 1.2103
55 H A -0.4831
56 E A -1.8469
57 Q A -1.5930
58 L A -0.2591
59 S A -1.4485
60 D A -2.6995
61 S A -2.4377
62 E A -3.9378
63 E A -4.3616
64 E A -4.3017
65 N A -3.8065
66 D A -3.3097
67 G A -2.0291
68 P A -1.1497
69 G A -0.9006
70 P A -1.0159
71 G A -1.3160
72 Q A -1.6115
73 S A -1.2222
74 T A -0.5483
75 H A -0.6384
76 V A 0.5184
77 D A -0.4683
78 I A 0.7731
79 R A -0.8010
80 T A -0.3476
81 L A 0.0555
82 E A -1.5480
83 D A -1.3543
84 L A 1.2839
85 L A 2.1970
86 M A 1.9129
87 G A 0.2465
88 P A -0.6115
89 G A -0.9329
90 P A -0.8184
91 G A -0.8216
92 T A -0.5035
93 P A -0.1175
94 T A 0.1724
95 L A 0.6281
96 H A -0.7137
97 E A -0.7960
98 Y A 1.1645
99 M A 1.4542
100 L A 1.3133
101 D A -0.1717
102 L A 0.3545
103 Q A -1.1039
104 P A -1.4441
105 E A -2.3177
106 T A -1.3701
107 G A -1.1174
108 P A -0.8357
109 G A -0.9225
110 P A -0.5344
111 G A -0.2649
112 L A 0.3004
113 Q A -0.8584
114 D A -0.4484
115 I A 2.0227
116 V A 2.8430
117 L A 2.4482
118 H A 0.6908
119 L A 0.5722
120 E A -1.6578
121 P A -1.9835
122 Q A -2.4357
123 N A -2.5221
124 E A -1.9269
125 I A 0.3792
126 P A -0.2263
127 G A -0.5085
128 P A -0.9407
129 G A -1.2755
130 P A -1.4894
131 G A -1.7898
132 A A -2.1309
133 E A -3.4656
134 K A -3.0378
135 L A -1.9690
136 R A -3.9158
137 H A -3.8912
138 L A -2.9312
139 N A -3.7269
140 E A -4.2785
141 K A -4.1380
142 R A -4.4816
143 R A -3.8553
144 F A -1.5137
145 H A -2.6381
146 N A -2.5458
147 G A -1.5194
148 P A -1.1183
149 G A -1.1528
150 P A -0.8854
151 G A -1.1701
152 L A -0.7549
153 D A -2.1472
154 K A -3.1009
155 K A -3.0854
156 Q A -2.8739
157 R A -3.0891
158 F A -1.3257
159 H A -2.6984
160 N A -2.6910
161 I A -1.1564
162 R A -2.3189
163 G A -1.9780
164 R A -2.2120
165 W A -0.3426
166 T A -0.6632
167 G A -0.7054
168 P A -0.6777
169 G A -1.0765
170 P A -1.1586
171 G A -1.8213
172 N A -2.3709
173 P A -1.7950
174 A A -2.0637
175 E A -3.2817
176 K A -2.9713
177 L A -1.4717
178 R A -3.2853
179 H A -3.1293
180 L A -1.7157
181 N A -3.3875
182 E A -4.0426
183 K A -3.9447
184 R A -3.7816
185 R A -3.0722
186 F A -0.3974
187 G A -0.8162
188 P A -0.6352
189 G A -0.7615
190 P A -0.9721
191 G A -0.9405
192 S A -1.1312
193 K A -1.3936
194 I A 0.3391
195 S A -0.8218
196 E A -1.4659
197 Y A 0.2006
198 R A -1.2334
199 H A -0.5499
200 Y A 1.1766
201 C A 1.4079
202 Y A 1.9383
203 S A 1.4147
204 L A 2.4828
205 Y A 2.1831
206 G A 0.5108
207 G A -0.3027
208 P A -0.7051
209 G A -0.3814
210 P A -0.1116
211 G A 0.8689
212 V A 2.6979
213 Y A 2.5070
214 D A 1.2666
215 F A 2.0987
216 A A 1.5943
217 F A 1.9057
218 R A -0.7499
219 D A -0.7577
220 L A 0.5167
221 A A 0.0554
222 A A -0.0591
223 Y A 0.3908
224 R A -0.7770
225 F A 1.0077
226 H A -0.2434
227 N A -0.7555
228 I A 1.1506
229 A A 0.6924
230 G A -0.2845
231 H A 0.2474
232 Y A 1.4923
233 A A 1.1677
234 A A 1.3240
235 Y A 1.8375
236 C A 1.9235
237 Y A 2.3004
238 S A 1.5770
239 L A 2.0856
240 Y A 2.0741
241 G A 1.4584
242 T A 0.8844
243 T A 1.1855
244 L A 1.7519
245 A A 0.7699
246 A A 0.8655
247 Y A 1.5453
248 K A -0.1284
249 T A 0.2759
250 V A 1.6542
251 L A 0.5705
252 E A -0.7196
253 L A 1.3105
254 T A 0.4262
255 E A -0.4641
256 V A 1.6083
257 A A 0.9663
258 A A 0.8448
259 Y A 1.4932
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Laboratory of Theory of Biopolymers 2018