| Chain sequence(s) |
H: QVQLQESGPGLVKPSETLSLTCTVSGFSLSNYDVHWVRQAPGKGLEWLGVIWSGGNTDYNTPFTSRLTISVDTSKNQFSLKLSSVTAADTAVYYCARALDYYDYEFAYWGQGTLVTVSS
L: EIVLTQSPDFQSVTPKEKVTITCRASQSIGTNIHWYQQKPDQSPKLLIKYASESISGIPSRFSGSGSGTDFTLTINSLEAEDAATYYCQQNNEWPTSFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5469 | |
| 2 | V | H | -1.0569 | |
| 3 | Q | H | -1.8321 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.8594 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8434 | |
| 8 | G | H | -0.4701 | |
| 9 | P | H | -0.0742 | |
| 11 | G | H | 0.3173 | |
| 12 | L | H | 0.8531 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.2205 | |
| 15 | P | H | -1.1997 | |
| 16 | S | H | -1.2984 | |
| 17 | E | H | -1.9183 | |
| 18 | T | H | -1.3980 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.9533 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.6528 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.2958 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.4260 | |
| 27 | G | H | -1.1742 | |
| 28 | F | H | -0.7524 | |
| 29 | S | H | -0.7386 | |
| 30 | L | H | 0.0000 | |
| 35 | S | H | -0.8769 | |
| 36 | N | H | -1.0555 | |
| 37 | Y | H | 0.2585 | |
| 38 | D | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7103 | |
| 45 | A | H | -0.7585 | |
| 46 | P | H | -0.8549 | |
| 47 | G | H | -1.4399 | |
| 48 | K | H | -2.3235 | |
| 49 | G | H | -1.4947 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0730 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.3960 | |
| 58 | S | H | -0.7185 | |
| 59 | G | H | -1.0934 | |
| 63 | G | H | -1.2112 | |
| 64 | N | H | -1.5609 | |
| 65 | T | H | -0.8189 | |
| 66 | D | H | -0.3908 | |
| 67 | Y | H | -0.0691 | |
| 68 | N | H | -0.3683 | |
| 69 | T | H | -0.3869 | |
| 70 | P | H | -0.4111 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -0.4043 | |
| 74 | S | H | -0.5012 | |
| 75 | R | H | -0.8465 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -0.6989 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5499 | |
| 80 | V | H | -0.6648 | |
| 81 | D | H | -1.4334 | |
| 82 | T | H | -1.3710 | |
| 83 | S | H | -1.4353 | |
| 84 | K | H | -2.2966 | |
| 85 | N | H | -1.7138 | |
| 86 | Q | H | -1.4622 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.5662 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.4879 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.1423 | |
| 93 | S | H | -1.0297 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5248 | |
| 96 | A | H | -0.1578 | |
| 97 | A | H | 0.0248 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2879 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.3237 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | A | H | 0.0000 | |
| 108 | L | H | 0.8975 | |
| 109 | D | H | 0.6882 | |
| 110 | Y | H | 1.6663 | |
| 111 | Y | H | 1.9362 | |
| 112 | D | H | 0.0000 | |
| 113 | Y | H | 0.4451 | |
| 114 | E | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | A | H | 0.1585 | |
| 117 | Y | H | 0.0146 | |
| 118 | W | H | -0.6494 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.9795 | |
| 121 | G | H | -0.9344 | |
| 122 | T | H | -0.0970 | |
| 123 | L | H | 0.9790 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.4218 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.2880 | |
| 128 | S | H | -0.4331 | |
| 1 | E | L | -1.3830 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8370 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.7388 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.9469 | |
| 8 | P | L | -0.6282 | |
| 9 | D | L | -1.4249 | |
| 10 | F | L | 0.2423 | |
| 11 | Q | L | -0.4860 | |
| 12 | S | L | -0.8298 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -2.0388 | |
| 15 | P | L | -2.3994 | |
| 16 | K | L | -3.0120 | |
| 17 | E | L | -3.1553 | |
| 18 | K | L | -3.0480 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.7229 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.9370 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.0183 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.6818 | |
| 27 | Q | L | -1.1358 | |
| 28 | S | L | -1.2612 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -0.9442 | |
| 37 | T | L | -0.7239 | |
| 38 | N | L | -0.7167 | |
| 39 | I | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2721 | |
| 45 | K | L | -1.8033 | |
| 46 | P | L | -1.6664 | |
| 47 | D | L | -2.6544 | |
| 48 | Q | L | -2.5410 | |
| 49 | S | L | -1.4992 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0049 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.7672 | |
| 56 | Y | L | -0.7149 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -1.2670 | |
| 66 | E | L | -2.0169 | |
| 67 | S | L | -1.1386 | |
| 68 | I | L | -0.4773 | |
| 69 | S | L | -0.4807 | |
| 70 | G | L | -0.4257 | |
| 71 | I | L | -0.1915 | |
| 72 | P | L | -0.2899 | |
| 74 | S | L | -0.5223 | |
| 75 | R | L | -0.9867 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7688 | |
| 78 | G | L | -0.7152 | |
| 79 | S | L | -0.7910 | |
| 80 | G | L | -0.9656 | |
| 83 | S | L | -1.0243 | |
| 84 | G | L | -1.1238 | |
| 85 | T | L | -1.5304 | |
| 86 | D | L | -1.9919 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6842 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.1993 | |
| 93 | S | L | -2.4497 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.2382 | |
| 96 | A | L | -1.7060 | |
| 97 | E | L | -2.1581 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.2826 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8677 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | N | L | -0.6198 | |
| 108 | N | L | -1.1613 | |
| 109 | E | L | -1.0536 | |
| 114 | W | L | 0.1522 | |
| 115 | P | L | 0.0000 | |
| 116 | T | L | 0.0000 | |
| 117 | S | L | -0.2257 | |
| 118 | F | L | 0.1019 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.4037 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3073 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.5447 | |
| 126 | I | L | -1.6443 | |
| 127 | K | L | -1.9495 |