| Chain sequence(s) |
A: GLPPLNPEPAPRRTTEYVTPTDLLYYAETDLITEVGHPTADIVVDGKVLLPRVSAYQWDVFLLKLPDPNTLPLPSPDFLDPATEIAIWRLRALYIKVYGPLGTGSYGLANFNKLGDVDNPTSYQHESADVTQSFSFTPVLKQEYIIGDEPPIGKYTARAAPAPGLPPGALPPLETVTTTIQHGDMADIGFGARDYAALEPSKDDVPDIIRDTTTKVPDYEGMKAEPYGTRMFDYGKYEKSKDVKRLVRAGPDLVPLPSSPPPSLLYTPPPPSSPYFILPSTNYFTIPDRGEITEEDLLFNKPIFLEETAGLNQGVLWHNRLYITVLDNSRAEIETIKTQVSTPAVNVYDASNYVTGKLYTREYKISMILQLCRIPLTPEVLEELRRRDPSILVDARLPEIPPVERPDPLAGLKFKEIDLTDKLSSDLESSELGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.1554 | |
| 2 | L | A | 1.3860 | |
| 3 | P | A | 0.3832 | |
| 4 | P | A | -0.0553 | |
| 5 | L | A | 0.7471 | |
| 6 | N | A | -1.3087 | |
| 7 | P | A | -1.5899 | |
| 8 | E | A | -2.3380 | |
| 9 | P | A | -1.5252 | |
| 10 | A | A | -0.8442 | |
| 11 | P | A | -0.8626 | |
| 12 | R | A | -1.2765 | |
| 13 | R | A | -1.3410 | |
| 14 | T | A | 0.0000 | |
| 15 | T | A | -1.2162 | |
| 16 | E | A | -2.1309 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6551 | |
| 20 | P | A | -0.7249 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6267 | |
| 23 | L | A | -0.4796 | |
| 24 | L | A | -0.3368 | |
| 25 | Y | A | -0.2592 | |
| 26 | Y | A | -0.5314 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8004 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2660 | |
| 31 | L | A | 0.3780 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | 0.0652 | |
| 34 | E | A | 0.1626 | |
| 35 | V | A | 0.7292 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.5035 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.7014 | |
| 40 | A | A | -0.5346 | |
| 41 | D | A | -0.0927 | |
| 42 | I | A | 1.8254 | |
| 43 | V | A | 2.4707 | |
| 44 | V | A | 1.5309 | |
| 45 | D | A | -1.0126 | |
| 46 | G | A | -0.5705 | |
| 47 | K | A | -0.2379 | |
| 48 | V | A | 2.1373 | |
| 49 | L | A | 2.5374 | |
| 50 | L | A | 1.7628 | |
| 51 | P | A | 0.4547 | |
| 52 | R | A | -0.2877 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | D | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1321 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.0254 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2239 | |
| 70 | T | A | -0.4032 | |
| 71 | L | A | -0.0835 | |
| 72 | P | A | -0.0836 | |
| 73 | L | A | 0.0174 | |
| 74 | P | A | -0.2826 | |
| 75 | S | A | -0.6944 | |
| 76 | P | A | -1.2409 | |
| 77 | D | A | -2.1073 | |
| 78 | F | A | -1.0216 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -1.9638 | |
| 81 | P | A | -1.2186 | |
| 82 | A | A | -0.6029 | |
| 83 | T | A | -0.6910 | |
| 84 | E | A | -1.0104 | |
| 85 | I | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3769 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.7481 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | Y | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.6375 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.2163 | |
| 99 | G | A | -0.4350 | |
| 100 | P | A | -0.3305 | |
| 101 | L | A | -0.1046 | |
| 102 | G | A | -0.6583 | |
| 103 | T | A | -0.7693 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.4447 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.4852 | |
| 108 | L | A | 0.0000 | |
| 109 | A | A | -0.8901 | |
| 110 | N | A | -1.9005 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3436 | |
| 113 | K | A | -1.0661 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6571 | |
| 117 | V | A | -1.3006 | |
| 118 | D | A | -2.1768 | |
| 119 | N | A | -2.1569 | |
| 120 | P | A | -1.1704 | |
| 121 | T | A | -0.6876 | |
| 122 | S | A | -0.5387 | |
| 123 | Y | A | -0.0724 | |
| 124 | Q | A | -0.6404 | |
| 125 | H | A | -1.2871 | |
| 126 | E | A | -2.0190 | |
| 127 | S | A | -1.6104 | |
| 128 | A | A | -1.1534 | |
| 129 | D | A | -2.2328 | |
| 130 | V | A | -1.5920 | |
| 131 | T | A | -1.5134 | |
| 132 | Q | A | -1.6290 | |
| 133 | S | A | -0.9559 | |
| 134 | F | A | -0.4852 | |
| 135 | S | A | -0.3858 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.1736 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.8414 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | -0.0532 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.4933 | |
| 155 | Y | A | -0.5941 | |
| 156 | T | A | -0.6074 | |
| 157 | A | A | -0.6597 | |
| 158 | R | A | -0.7104 | |
| 159 | A | A | -0.3765 | |
| 160 | A | A | -0.2731 | |
| 161 | P | A | 0.0183 | |
| 162 | A | A | -0.1081 | |
| 163 | P | A | -0.3090 | |
| 164 | G | A | -0.3058 | |
| 165 | L | A | 0.4430 | |
| 166 | P | A | -0.0584 | |
| 167 | P | A | -0.2561 | |
| 168 | G | A | 0.0519 | |
| 169 | A | A | 0.7956 | |
| 170 | L | A | 1.7730 | |
| 171 | P | A | 0.7114 | |
| 172 | P | A | 0.5028 | |
| 173 | L | A | 0.6765 | |
| 174 | E | A | -0.7621 | |
| 175 | T | A | -0.5329 | |
| 176 | V | A | -0.2656 | |
| 177 | T | A | -0.2290 | |
| 178 | T | A | -0.0351 | |
| 179 | T | A | -0.2650 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.8654 | |
| 182 | H | A | -1.1610 | |
| 183 | G | A | -0.8068 | |
| 184 | D | A | -0.6916 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.6026 | |
| 190 | F | A | -0.1622 | |
| 191 | G | A | -0.3608 | |
| 192 | A | A | -0.4868 | |
| 193 | R | A | -0.8923 | |
| 194 | D | A | -1.0245 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.1354 | |
| 197 | A | A | -0.7371 | |
| 198 | L | A | -0.2573 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -0.9632 | |
| 201 | S | A | -1.0815 | |
| 202 | K | A | -2.2019 | |
| 203 | D | A | -1.7309 | |
| 204 | D | A | -1.2808 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.5450 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -1.9902 | |
| 211 | D | A | -2.2454 | |
| 212 | T | A | -1.2540 | |
| 213 | T | A | -0.8228 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.1152 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.0020 | |
| 219 | Y | A | -1.2779 | |
| 220 | E | A | -2.4529 | |
| 221 | G | A | -1.7189 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.2857 | |
| 224 | A | A | -1.3753 | |
| 225 | E | A | -1.1358 | |
| 226 | P | A | -0.6425 | |
| 227 | Y | A | -0.4356 | |
| 228 | G | A | 0.0000 | |
| 229 | T | A | 0.0000 | |
| 230 | R | A | -0.9433 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.4691 | |
| 234 | Y | A | -0.0405 | |
| 235 | G | A | -0.4401 | |
| 236 | K | A | -1.3741 | |
| 237 | Y | A | -1.0878 | |
| 238 | E | A | -1.8638 | |
| 239 | K | A | -1.9912 | |
| 240 | S | A | -2.1084 | |
| 241 | K | A | -2.6018 | |
| 242 | D | A | -2.6623 | |
| 243 | V | A | -1.2380 | |
| 244 | K | A | -2.3710 | |
| 245 | R | A | -2.5274 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5052 | |
| 249 | A | A | -1.0608 | |
| 250 | G | A | -0.6927 | |
| 251 | P | A | -0.0943 | |
| 252 | D | A | 0.8547 | |
| 253 | L | A | 2.3287 | |
| 254 | V | A | 2.4679 | |
| 255 | P | A | 1.2816 | |
| 256 | L | A | 1.5208 | |
| 257 | P | A | 0.6497 | |
| 258 | S | A | 0.2742 | |
| 259 | S | A | -0.2512 | |
| 260 | P | A | 0.1884 | |
| 261 | P | A | -0.0556 | |
| 262 | P | A | 0.0223 | |
| 263 | S | A | 0.2789 | |
| 264 | L | A | 1.1675 | |
| 265 | L | A | 1.7985 | |
| 266 | Y | A | 1.0853 | |
| 267 | T | A | 0.2620 | |
| 268 | P | A | 0.3968 | |
| 269 | P | A | 0.5092 | |
| 270 | P | A | 0.0142 | |
| 271 | P | A | 0.1143 | |
| 272 | S | A | -0.1842 | |
| 273 | S | A | 0.4966 | |
| 274 | P | A | 0.7501 | |
| 275 | Y | A | 1.8859 | |
| 276 | F | A | 1.9836 | |
| 277 | I | A | 2.5262 | |
| 278 | L | A | 1.6394 | |
| 279 | P | A | 0.2989 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | 0.4659 | |
| 282 | N | A | 0.0637 | |
| 283 | Y | A | 0.6645 | |
| 284 | F | A | -0.1536 | |
| 285 | T | A | -1.1364 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.5445 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.6010 | |
| 291 | E | A | -2.0549 | |
| 292 | I | A | -1.4339 | |
| 293 | T | A | -1.8209 | |
| 294 | E | A | -2.6092 | |
| 295 | E | A | -2.7480 | |
| 296 | D | A | -2.0088 | |
| 297 | L | A | -1.1267 | |
| 298 | L | A | -0.9284 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2459 | |
| 301 | K | A | -1.7820 | |
| 302 | P | A | -0.9782 | |
| 303 | I | A | -0.3183 | |
| 304 | F | A | -0.7115 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.6404 | |
| 307 | E | A | -2.7179 | |
| 308 | T | A | 0.0000 | |
| 309 | A | A | -0.6316 | |
| 310 | G | A | -0.7128 | |
| 311 | L | A | -0.5225 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -1.0354 | |
| 319 | N | A | -1.0975 | |
| 320 | R | A | -1.3168 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.4758 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -1.8373 | |
| 333 | I | A | -1.4710 | |
| 334 | E | A | -1.8895 | |
| 335 | T | A | -1.2726 | |
| 336 | I | A | -0.2344 | |
| 337 | K | A | -0.8368 | |
| 338 | T | A | -0.0186 | |
| 339 | Q | A | 0.1661 | |
| 340 | V | A | 1.4778 | |
| 341 | S | A | 0.4809 | |
| 342 | T | A | 0.0382 | |
| 343 | P | A | -0.2041 | |
| 344 | A | A | 0.2759 | |
| 345 | V | A | 0.6713 | |
| 346 | N | A | 0.0198 | |
| 347 | V | A | 1.6717 | |
| 348 | Y | A | 1.3945 | |
| 349 | D | A | -0.2726 | |
| 350 | A | A | 0.0561 | |
| 351 | S | A | 0.0738 | |
| 352 | N | A | 0.4955 | |
| 353 | Y | A | 0.8030 | |
| 354 | V | A | 1.5724 | |
| 355 | T | A | -0.0050 | |
| 356 | G | A | -0.6966 | |
| 357 | K | A | -1.6786 | |
| 358 | L | A | -0.7707 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.2346 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.0866 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.5202 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | M | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | Q | A | -0.4452 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.7705 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6348 | |
| 376 | L | A | -0.4995 | |
| 377 | T | A | -0.9039 | |
| 378 | P | A | -1.4627 | |
| 379 | E | A | -2.3862 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -1.5891 | |
| 382 | E | A | -2.7624 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.1219 | |
| 386 | R | A | -2.0592 | |
| 387 | R | A | -1.3953 | |
| 388 | D | A | -1.2629 | |
| 389 | P | A | -1.3440 | |
| 390 | S | A | 0.0000 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.2428 | |
| 394 | D | A | -1.6569 | |
| 395 | A | A | -1.5606 | |
| 396 | R | A | -2.4746 | |
| 397 | L | A | -1.5463 | |
| 398 | P | A | -1.4454 | |
| 399 | E | A | -2.0412 | |
| 400 | I | A | -0.8884 | |
| 401 | P | A | -0.5874 | |
| 402 | P | A | -0.6743 | |
| 403 | V | A | 0.3648 | |
| 404 | E | A | -1.7543 | |
| 405 | R | A | -1.9586 | |
| 406 | P | A | -1.5357 | |
| 407 | D | A | -1.6956 | |
| 408 | P | A | -0.8276 | |
| 409 | L | A | -0.4518 | |
| 410 | A | A | -0.6147 | |
| 411 | G | A | -0.6811 | |
| 412 | L | A | -0.5425 | |
| 413 | K | A | -1.9793 | |
| 414 | F | A | -1.4507 | |
| 415 | K | A | -1.9418 | |
| 416 | E | A | -2.7249 | |
| 417 | I | A | -2.1126 | |
| 418 | D | A | -2.8696 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.7513 | |
| 421 | D | A | -2.3558 | |
| 422 | K | A | -1.8041 | |
| 423 | L | A | -0.7680 | |
| 424 | S | A | -0.9111 | |
| 425 | S | A | -1.0695 | |
| 426 | D | A | -2.4734 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -2.9225 | |
| 429 | S | A | -2.0622 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -1.8186 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.8129 | |
| 435 | E | A | -2.1334 | |
| 436 | Y | A | -1.1894 | |
| 437 | L | A | -0.7852 | |
| 438 | N | A | -2.0559 | |
| 439 | R | A | -2.2831 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine