| Chain sequence(s) |
A: GLPALNPEPELRSTDDYVTPTDLLYIAETDLLTEIGHPTRDIIVNGKVVLPRVSAYQWRVFKLKLPDPNTLPLPSSDFIDPSTEILIWRLKAFYIKVFGPLGKGSYGHPDFNRLGDVDNPTAPVHCGEDDTVNFSFYPKLKQMYIIGDEPPTGKYTAPAAPSPGLPPGAIPPTTTVTTTIQDGDMADIGFGAKDFAKLLPSKNDVPEIIRDTKTVVPDLAGMKAEPLGRRMFTHDEYEQSKDSRLYRLCGEDPIPLPNRSPPSPLYVEPPPTSPYAIPAPRRLFTIPDAGEITEDKLLFNKPVFLEKTAGKNNAILWYNQLYITVLDNSRAEIEKIRTRISTPLPDVFDPSDYVESRLYKREYQLELIVQLCKIPLTPETLELIRREDPRILVLAKLPDIPPEEFEDPYKGLKFHEIDLTDKLSSDLSKYPLGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.2091 | |
| 2 | L | A | 1.4725 | |
| 3 | P | A | 0.5684 | |
| 4 | A | A | 0.3887 | |
| 5 | L | A | 0.8869 | |
| 6 | N | A | -1.2162 | |
| 7 | P | A | -1.8383 | |
| 8 | E | A | -2.6600 | |
| 9 | P | A | -2.3074 | |
| 10 | E | A | -2.5794 | |
| 11 | L | A | -1.6758 | |
| 12 | R | A | -2.2726 | |
| 13 | S | A | -1.9871 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.7311 | |
| 16 | D | A | -2.8041 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.8603 | |
| 20 | P | A | -0.8975 | |
| 21 | T | A | -0.9273 | |
| 22 | D | A | -1.6389 | |
| 23 | L | A | -0.5111 | |
| 24 | L | A | -0.2152 | |
| 25 | Y | A | -0.0914 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.7610 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3684 | |
| 31 | L | A | 0.2357 | |
| 32 | L | A | 0.0963 | |
| 33 | T | A | 0.0828 | |
| 34 | E | A | 0.0918 | |
| 35 | I | A | 0.8014 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4241 | |
| 40 | R | A | -2.2271 | |
| 41 | D | A | -0.6157 | |
| 42 | I | A | 1.4903 | |
| 43 | I | A | 2.6060 | |
| 44 | V | A | 1.9218 | |
| 45 | N | A | -0.4343 | |
| 46 | G | A | -0.2639 | |
| 47 | K | A | 0.0092 | |
| 48 | V | A | 2.0875 | |
| 49 | V | A | 2.7948 | |
| 50 | L | A | 1.7484 | |
| 51 | P | A | 0.2971 | |
| 52 | R | A | -0.8431 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.7874 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.7720 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.9509 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9021 | |
| 70 | T | A | -0.4789 | |
| 71 | L | A | -0.1557 | |
| 72 | P | A | -0.1436 | |
| 73 | L | A | -0.0454 | |
| 74 | P | A | -0.3451 | |
| 75 | S | A | -0.7342 | |
| 76 | S | A | -1.1743 | |
| 77 | D | A | -2.0105 | |
| 78 | F | A | -0.8699 | |
| 79 | I | A | -1.1975 | |
| 80 | D | A | -1.8784 | |
| 81 | P | A | -1.4924 | |
| 82 | S | A | -0.8060 | |
| 83 | T | A | -0.7885 | |
| 84 | E | A | -1.0900 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3300 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6162 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | Y | A | -0.3991 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.3727 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.4806 | |
| 99 | G | A | -0.4641 | |
| 100 | P | A | -0.4572 | |
| 101 | L | A | -0.4226 | |
| 102 | G | A | -1.0685 | |
| 103 | K | A | -1.2358 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.3206 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.7233 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.5123 | |
| 110 | D | A | -2.5818 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.4498 | |
| 113 | R | A | -0.8804 | |
| 114 | L | A | -0.3271 | |
| 115 | G | A | -0.4018 | |
| 116 | D | A | -1.2942 | |
| 117 | V | A | -0.9819 | |
| 118 | D | A | -2.6466 | |
| 119 | N | A | -2.3763 | |
| 120 | P | A | -1.3323 | |
| 121 | T | A | -0.6707 | |
| 122 | A | A | -0.1395 | |
| 123 | P | A | 0.4851 | |
| 124 | V | A | 0.5312 | |
| 125 | H | A | 0.0768 | |
| 126 | C | A | -0.8669 | |
| 127 | G | A | -1.9658 | |
| 128 | E | A | -3.0148 | |
| 129 | D | A | -3.1846 | |
| 130 | D | A | -2.1635 | |
| 131 | T | A | -1.8804 | |
| 132 | V | A | -1.1985 | |
| 133 | N | A | -1.6397 | |
| 134 | F | A | -0.8563 | |
| 135 | S | A | -0.3210 | |
| 136 | F | A | 0.0000 | |
| 137 | Y | A | 0.1632 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | M | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | 0.0000 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.2169 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.3139 | |
| 155 | Y | A | -0.3244 | |
| 156 | T | A | -0.5839 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.3831 | |
| 159 | A | A | -0.1446 | |
| 160 | A | A | -0.1860 | |
| 161 | P | A | -0.3496 | |
| 162 | S | A | -0.3046 | |
| 163 | P | A | -0.4064 | |
| 164 | G | A | -0.3462 | |
| 165 | L | A | 0.4780 | |
| 166 | P | A | -0.0017 | |
| 167 | P | A | -0.2041 | |
| 168 | G | A | -0.4143 | |
| 169 | A | A | 0.9010 | |
| 170 | I | A | 2.0380 | |
| 171 | P | A | 0.7404 | |
| 172 | P | A | 0.2770 | |
| 173 | T | A | 0.0227 | |
| 174 | T | A | -0.1040 | |
| 175 | T | A | -0.0786 | |
| 176 | V | A | 0.1504 | |
| 177 | T | A | -0.0378 | |
| 178 | T | A | -0.0576 | |
| 179 | T | A | -0.2896 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7189 | |
| 182 | D | A | 0.0000 | |
| 183 | G | A | -0.6156 | |
| 184 | D | A | -0.5958 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5558 | |
| 190 | F | A | -0.0293 | |
| 191 | G | A | -0.2709 | |
| 192 | A | A | -0.4720 | |
| 193 | K | A | -1.0792 | |
| 194 | D | A | -1.4690 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -2.0715 | |
| 197 | K | A | -2.2521 | |
| 198 | L | A | -0.7547 | |
| 199 | L | A | -1.0580 | |
| 200 | P | A | -1.3194 | |
| 201 | S | A | -1.1628 | |
| 202 | K | A | -2.4814 | |
| 203 | N | A | -1.7279 | |
| 204 | D | A | -1.1392 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.8095 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.2384 | |
| 211 | D | A | -2.9099 | |
| 212 | T | A | -1.7473 | |
| 213 | K | A | -1.5186 | |
| 214 | T | A | 0.0000 | |
| 215 | V | A | 0.0000 | |
| 216 | V | A | 0.2219 | |
| 217 | P | A | 0.0662 | |
| 218 | D | A | -0.3956 | |
| 219 | L | A | -0.4877 | |
| 220 | A | A | -0.6377 | |
| 221 | G | A | -0.8924 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -1.8826 | |
| 224 | A | A | -1.0483 | |
| 225 | E | A | -1.0818 | |
| 226 | P | A | -0.9954 | |
| 227 | L | A | -0.6285 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.6518 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7199 | |
| 234 | H | A | -0.9314 | |
| 235 | D | A | -1.5764 | |
| 236 | E | A | -2.1760 | |
| 237 | Y | A | -1.7012 | |
| 238 | E | A | -2.2579 | |
| 239 | Q | A | -1.7601 | |
| 240 | S | A | -2.2288 | |
| 241 | K | A | -3.2429 | |
| 242 | D | A | -3.1949 | |
| 243 | S | A | -2.3586 | |
| 244 | R | A | -2.7224 | |
| 245 | L | A | -1.0098 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0024 | |
| 248 | L | A | -0.2235 | |
| 249 | C | A | -1.1472 | |
| 250 | G | A | -1.6827 | |
| 251 | E | A | -2.2973 | |
| 252 | D | A | -1.5568 | |
| 253 | P | A | 0.0267 | |
| 254 | I | A | 1.5219 | |
| 255 | P | A | -0.1935 | |
| 256 | L | A | -0.0502 | |
| 257 | P | A | -0.5862 | |
| 258 | N | A | -1.9382 | |
| 259 | R | A | -1.8321 | |
| 260 | S | A | -1.4250 | |
| 261 | P | A | -0.7279 | |
| 262 | P | A | -0.4789 | |
| 263 | S | A | -0.2735 | |
| 264 | P | A | 0.3431 | |
| 265 | L | A | 1.4355 | |
| 266 | Y | A | 1.2440 | |
| 267 | V | A | 1.4782 | |
| 268 | E | A | 0.2860 | |
| 269 | P | A | 0.4111 | |
| 270 | P | A | -0.2375 | |
| 271 | P | A | -0.0819 | |
| 272 | T | A | 0.0407 | |
| 273 | S | A | 0.3181 | |
| 274 | P | A | 0.7243 | |
| 275 | Y | A | 1.6624 | |
| 276 | A | A | 1.2085 | |
| 277 | I | A | 2.2560 | |
| 278 | P | A | 0.9065 | |
| 279 | A | A | 0.4202 | |
| 280 | P | A | 0.0000 | |
| 281 | R | A | -1.2144 | |
| 282 | R | A | -0.5616 | |
| 283 | L | A | 1.1801 | |
| 284 | F | A | 0.4497 | |
| 285 | T | A | -0.7645 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.8814 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.7469 | |
| 291 | E | A | -2.1981 | |
| 292 | I | A | -1.5479 | |
| 293 | T | A | -2.0767 | |
| 294 | E | A | -2.9070 | |
| 295 | D | A | -3.1912 | |
| 296 | K | A | -2.8711 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -1.4127 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1558 | |
| 301 | K | A | -1.6814 | |
| 302 | P | A | -0.5181 | |
| 303 | V | A | -0.1192 | |
| 304 | F | A | -0.3697 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5699 | |
| 307 | K | A | -2.7717 | |
| 308 | T | A | 0.0000 | |
| 309 | A | A | -0.8550 | |
| 310 | G | A | -0.9670 | |
| 311 | K | A | -1.3365 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | A | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | Y | A | -0.0646 | |
| 319 | N | A | -0.6693 | |
| 320 | Q | A | -1.1083 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.7862 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.5653 | |
| 333 | I | A | -2.0360 | |
| 334 | E | A | -2.7824 | |
| 335 | K | A | -3.1592 | |
| 336 | I | A | -1.7235 | |
| 337 | R | A | -2.4350 | |
| 338 | T | A | -1.0148 | |
| 339 | R | A | -0.4307 | |
| 340 | I | A | 1.3333 | |
| 341 | S | A | 0.5149 | |
| 342 | T | A | 0.2750 | |
| 343 | P | A | 0.2235 | |
| 344 | L | A | 1.1530 | |
| 345 | P | A | 0.5371 | |
| 346 | D | A | -0.2967 | |
| 347 | V | A | 1.7213 | |
| 348 | F | A | 1.9605 | |
| 349 | D | A | -0.0942 | |
| 350 | P | A | -0.5319 | |
| 351 | S | A | -0.0661 | |
| 352 | D | A | 0.1288 | |
| 353 | Y | A | -0.0687 | |
| 354 | V | A | 0.2850 | |
| 355 | E | A | -2.3415 | |
| 356 | S | A | -1.7902 | |
| 357 | R | A | -2.1717 | |
| 358 | L | A | -1.0191 | |
| 359 | Y | A | 0.0000 | |
| 360 | K | A | -0.8343 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | 0.0892 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.2610 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.4104 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6259 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6537 | |
| 376 | L | A | -0.5620 | |
| 377 | T | A | -0.7719 | |
| 378 | P | A | -1.1751 | |
| 379 | E | A | -2.1928 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.3941 | |
| 382 | E | A | -2.2434 | |
| 383 | L | A | -2.1481 | |
| 384 | I | A | 0.0000 | |
| 385 | R | A | -3.1930 | |
| 386 | R | A | -2.8842 | |
| 387 | E | A | -1.8635 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -1.6236 | |
| 390 | R | A | -1.1610 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.3818 | |
| 394 | L | A | -0.0177 | |
| 395 | A | A | -0.4530 | |
| 396 | K | A | -1.5892 | |
| 397 | L | A | -0.9096 | |
| 398 | P | A | -1.2868 | |
| 399 | D | A | -1.8747 | |
| 400 | I | A | -1.3968 | |
| 401 | P | A | -1.6706 | |
| 402 | P | A | -2.0112 | |
| 403 | E | A | -2.8969 | |
| 404 | E | A | -2.8527 | |
| 405 | F | A | -2.0302 | |
| 406 | E | A | -3.1845 | |
| 407 | D | A | -2.5333 | |
| 408 | P | A | -1.6398 | |
| 409 | Y | A | -1.6562 | |
| 410 | K | A | -2.7328 | |
| 411 | G | A | -1.5392 | |
| 412 | L | A | -1.0452 | |
| 413 | K | A | -2.1186 | |
| 414 | F | A | -1.3260 | |
| 415 | H | A | -1.6510 | |
| 416 | E | A | -2.8951 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -3.2801 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0001 | |
| 421 | D | A | -2.2885 | |
| 422 | K | A | -1.8348 | |
| 423 | L | A | -0.6575 | |
| 424 | S | A | -0.7497 | |
| 425 | S | A | -0.5273 | |
| 426 | D | A | -1.3140 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.4261 | |
| 429 | K | A | -2.2077 | |
| 430 | Y | A | -1.1526 | |
| 431 | P | A | -0.6641 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5488 | |
| 435 | L | A | -0.1719 | |
| 436 | Y | A | -0.0382 | |
| 437 | L | A | 0.1623 | |
| 438 | N | A | -1.4906 | |
| 439 | R | A | -1.8542 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine