Project name: a9260d97d5ec8ae

Status: done

Started: 2026-02-23 14:52:05
Settings
Chain sequence(s) A: FEFEFEGSKGH
C: FEFEFEGSKGH
B: FEFEFEGSKGH
E: FEFEFEGSKGH
D: FEFEFEGSKGH
G: FEFEFEGSKGH
F: FEFEFEGSKGH
I: FEFEFEGSKGH
H: FEFEFEGSKGH
K: FEFEFEGSKGH
J: FEFEFEGSKGH
L: FEFEFEGSKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:22)
Show buried residues

Minimal score value
-3.88
Maximal score value
1.1249
Average score
-1.635
Total score value
-215.8215

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A -1.4092
2 E A -2.6293
3 F A 0.0000
4 E A -2.8030
5 F A 0.0000
6 E A -3.3825
7 G A 0.0000
8 S A -2.4906
9 K A 0.0000
10 G A -1.9741
11 H A -1.3027
1 F B -1.3131
2 E B -2.8434
3 F B 0.0000
4 E B -3.2283
5 F B 0.0000
6 E B -3.8800
7 G B 0.0000
8 S B -2.5595
9 K B 0.0000
10 G B -1.6903
11 H B -1.1181
1 F C 0.4372
2 E C -1.6962
3 F C -1.6170
4 E C -2.8980
5 F C -2.6051
6 E C -3.2204
7 G C -2.3644
8 S C -1.6178
9 K C -2.0842
10 G C -1.6452
11 H C -1.3209
1 F D 0.5420
2 E D -1.8278
3 F D -1.1729
4 E D -2.4540
5 F D -1.0324
6 E D -2.5638
7 G D -2.5280
8 S D -2.1594
9 K D -2.6673
10 G D -2.1884
11 H D -2.1067
1 F E -0.8274
2 E E -2.7466
3 F E 0.0000
4 E E -3.4025
5 F E 0.0000
6 E E -3.6631
7 G E 0.0000
8 S E -2.5249
9 K E -2.3454
10 G E -2.5197
11 H E -2.3035
1 F F -1.6680
2 E F -3.2170
3 F F 0.0000
4 E F -3.1397
5 F F 0.0000
6 E F -3.7519
7 G F 0.0000
8 S F -2.5596
9 K F 0.0000
10 G F -1.9701
11 H F -1.5687
1 F G -1.4941
2 E G -2.9104
3 F G 0.0000
4 E G -2.8862
5 F G 0.0000
6 E G -3.8417
7 G G 0.0000
8 S G -2.6385
9 K G 0.0000
10 G G -2.5528
11 H G -2.0522
1 F H -1.4109
2 E H -2.8109
3 F H 0.0000
4 E H -2.9830
5 F H 0.0000
6 E H -3.8037
7 G H 0.0000
8 S H -2.7316
9 K H 0.0000
10 G H -2.3230
11 H H -1.9415
1 F I -1.4431
2 E I -3.0450
3 F I 0.0000
4 E I -3.4254
5 F I 0.0000
6 E I -3.7744
7 G I 0.0000
8 S I -2.3587
9 K I 0.0000
10 G I -1.7488
11 H I -1.0861
1 F J 0.4556
2 E J -1.6454
3 F J -1.3395
4 E J -2.3069
5 F J -1.3918
6 E J -2.7351
7 G J -2.4302
8 S J -1.9802
9 K J -2.0693
10 G J -1.8768
11 H J -1.5885
1 F K 1.1249
2 E K -1.1426
3 F K -0.9350
4 E K -2.7426
5 F K -1.9258
6 E K -2.6502
7 G K -1.7955
8 S K -1.1026
9 K K -1.3019
10 G K -1.5635
11 H K -1.6190
1 F L -0.0714
2 E L -2.0371
3 F L 0.0000
4 E L -3.0423
5 F L 0.0000
6 E L -3.2535
7 G L -2.1443
8 S L -1.8533
9 K L 0.0000
10 G L -1.9396
11 H L -2.0332
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Laboratory of Theory of Biopolymers 2018