Project name: 4-5R4

Status: done

Started: 2025-02-21 02:07:42
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Chain sequence(s) A: MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFAFAVTNDGVI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:03)
Show buried residues

Minimal score value
-2.8277
Maximal score value
3.1192
Average score
-0.9007
Total score value
-93.673

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2227
2 T A -0.9871
3 E A -2.3436
4 Q A -2.3518
5 Q A -1.7882
6 W A -0.6623
7 N A -1.7485
8 F A -1.0545
9 A A -0.6387
10 G A -0.6493
11 I A -0.4461
12 E A -1.6143
13 A A -0.8171
14 A A -0.3734
15 A A -1.0904
16 S A -0.9312
17 A A -0.6950
18 I A -0.8580
19 Q A -1.3839
20 G A -1.2430
21 N A -1.5482
22 V A -0.8431
23 T A -0.8493
24 S A -0.6303
25 I A -0.4370
26 H A -1.1949
27 S A -1.0015
28 L A -0.1131
29 L A -1.1433
30 D A -2.8079
31 E A -2.8277
32 G A -2.0778
33 K A -2.2863
34 Q A -2.7504
35 S A -1.9851
36 L A -1.1795
37 T A -1.4788
38 K A -1.6178
39 L A -0.1151
40 A A -0.4437
41 A A -0.2021
42 A A 0.0943
43 W A 0.3535
44 G A -0.3266
45 G A -0.9343
46 S A -0.8610
47 G A -0.8441
48 S A -1.4301
49 E A -2.3279
50 A A -1.1563
51 Y A -0.9488
52 Q A -2.1894
53 G A -1.8020
54 V A -0.8838
55 Q A -1.6875
56 Q A -2.3247
57 K A -2.2926
58 W A -1.4605
59 D A -1.7381
60 A A -1.4180
61 T A -1.3651
62 A A 0.0000
63 T A -1.5006
64 E A -2.1533
65 L A -1.0518
66 N A -1.5435
67 N A -2.2564
68 A A -1.4480
69 L A -1.5041
70 Q A -2.3514
71 N A -1.8815
72 L A -0.9638
73 A A -1.7954
74 R A -2.7113
75 T A -1.7422
76 I A -1.3922
77 S A -2.0800
78 E A -2.5731
79 A A -1.4360
80 G A 0.0000
81 Q A -1.8378
82 A A -0.9538
83 M A -0.6686
84 A A -1.0121
85 S A -0.8790
86 T A -0.8559
87 E A -1.3440
88 G A -0.9145
89 N A -1.0477
90 V A 0.4426
91 T A 0.6062
92 G A 0.8552
93 M A 2.1590
94 F A 3.1192
95 A A 2.4086
96 F A 2.7679
97 A A 1.7046
98 V A 2.4550
99 T A 1.0806
100 N A -0.7655
101 D A -1.0589
102 G A 0.0443
103 V A 2.1874
104 I A 2.7484
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Laboratory of Theory of Biopolymers 2018