Project name: a92b9b29383dc68

Status: done

Started: 2026-05-21 14:49:18
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Chain sequence(s) A: FGGHKGG
C: FGGHKGG
B: FGGHKGG
E: FGGHKGG
D: FGGHKGG
G: FGGHKGG
F: FGGHKGG
I: FGGHKGG
H: FGGHKGG
K: FGGHKGG
J: FGGHKGG
M: FGGHKGG
L: FGGHKGG
O: FGGHKGG
N: FGGHKGG
Q: FGGHKGG
P: FGGHKGG
S: FGGHKGG
R: FGGHKGG
T: FGGHKGG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:15)
Show buried residues

Minimal score value
-4.0581
Maximal score value
2.4793
Average score
-0.8283
Total score value
-115.9636

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 0.0602
2 G A -0.2145
3 G A -0.9727
4 H A 0.0000
5 K A -2.8876
6 G A 0.0000
7 G A -1.5023
1 F B 0.6243
2 G B -0.1443
3 G B -0.9909
4 H B 0.0000
5 K B -2.8352
6 G B 0.0000
7 G B -1.1675
1 F C 1.6127
2 G C 0.2624
3 G C -0.9010
4 H C -2.3164
5 K C -3.5474
6 G C -2.2177
7 G C -1.3857
1 F D 2.4793
2 G D 0.7631
3 G D -0.9803
4 H D -2.6018
5 K D -4.0581
6 G D -2.7783
7 G D -1.8644
1 F E 2.3155
2 G E 0.7922
3 G E -0.8398
4 H E -2.3261
5 K E -3.5649
6 G E -2.1570
7 G E -1.4574
1 F F 1.3657
2 G F 0.4066
3 G F -0.6002
4 H F 0.0000
5 K F -2.6023
6 G F -1.3150
7 G F -1.0774
1 F G 0.1947
2 G G -0.2286
3 G G -0.9525
4 H G 0.0000
5 K G -3.1441
6 G G 0.0000
7 G G -1.2197
1 F H 0.5911
2 G H 0.0254
3 G H -0.9526
4 H H 0.0000
5 K H -2.9349
6 G H 0.0000
7 G H -1.4202
1 F I 0.1846
2 G I -0.2921
3 G I -1.0493
4 H I 0.0000
5 K I -3.1220
6 G I 0.0000
7 G I -1.3653
1 F J 0.0460
2 G J -0.2464
3 G J -1.0780
4 H J 0.0000
5 K J -3.0495
6 G J 0.0000
7 G J -1.4022
1 F K 0.0624
2 G K -0.2394
3 G K -1.0396
4 H K 0.0000
5 K K -3.1211
6 G K 0.0000
7 G K -1.3606
1 F L 0.5977
2 G L 0.1751
3 G L -0.7367
4 H L 0.0000
5 K L -2.7524
6 G L 0.0000
7 G L -1.2863
1 F M 0.2731
2 G M -0.0577
3 G M -0.7585
4 H M 0.0000
5 K M -2.7275
6 G M 0.0000
7 G M -1.2881
1 F N 0.5904
2 G N 0.2164
3 G N -0.6277
4 H N 0.0000
5 K N -2.5517
6 G N -1.5914
7 G N -1.0977
1 F O 1.4252
2 G O 0.2228
3 G O -0.6957
4 H O -1.9128
5 K O -2.7964
6 G O -1.8085
7 G O -1.0500
1 F P 1.4149
2 G P 0.1900
3 G P -0.7479
4 H P -1.7005
5 K P -2.6799
6 G P -1.6181
7 G P -0.9098
1 F Q 0.3244
2 G Q -0.0091
3 G Q -0.7027
4 H Q 0.0000
5 K Q -2.9195
6 G Q 0.0000
7 G Q -1.4556
1 F R -0.0614
2 G R -0.1711
3 G R -0.8852
4 H R 0.0000
5 K R -2.6959
6 G R 0.0000
7 G R -1.4436
1 F S -0.0659
2 G S -0.1995
3 G S -0.9611
4 H S 0.0000
5 K S -3.0660
6 G S 0.0000
7 G S -1.5024
1 F T -0.0975
2 G T -0.2050
3 G T -0.9797
4 H T 0.0000
5 K T -3.1865
6 G T -2.1390
7 G T -1.5135
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Laboratory of Theory of Biopolymers 2018