| Chain sequence(s) |
A: FGGHKGG
C: FGGHKGG B: FGGHKGG E: FGGHKGG D: FGGHKGG G: FGGHKGG F: FGGHKGG I: FGGHKGG H: FGGHKGG K: FGGHKGG J: FGGHKGG M: FGGHKGG L: FGGHKGG O: FGGHKGG N: FGGHKGG Q: FGGHKGG P: FGGHKGG S: FGGHKGG R: FGGHKGG T: FGGHKGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:12)
[INFO] Main: Simulation completed successfully. (00:04:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.0602 | |
| 2 | G | A | -0.2145 | |
| 3 | G | A | -0.9727 | |
| 4 | H | A | 0.0000 | |
| 5 | K | A | -2.8876 | |
| 6 | G | A | 0.0000 | |
| 7 | G | A | -1.5023 | |
| 1 | F | B | 0.6243 | |
| 2 | G | B | -0.1443 | |
| 3 | G | B | -0.9909 | |
| 4 | H | B | 0.0000 | |
| 5 | K | B | -2.8352 | |
| 6 | G | B | 0.0000 | |
| 7 | G | B | -1.1675 | |
| 1 | F | C | 1.6127 | |
| 2 | G | C | 0.2624 | |
| 3 | G | C | -0.9010 | |
| 4 | H | C | -2.3164 | |
| 5 | K | C | -3.5474 | |
| 6 | G | C | -2.2177 | |
| 7 | G | C | -1.3857 | |
| 1 | F | D | 2.4793 | |
| 2 | G | D | 0.7631 | |
| 3 | G | D | -0.9803 | |
| 4 | H | D | -2.6018 | |
| 5 | K | D | -4.0581 | |
| 6 | G | D | -2.7783 | |
| 7 | G | D | -1.8644 | |
| 1 | F | E | 2.3155 | |
| 2 | G | E | 0.7922 | |
| 3 | G | E | -0.8398 | |
| 4 | H | E | -2.3261 | |
| 5 | K | E | -3.5649 | |
| 6 | G | E | -2.1570 | |
| 7 | G | E | -1.4574 | |
| 1 | F | F | 1.3657 | |
| 2 | G | F | 0.4066 | |
| 3 | G | F | -0.6002 | |
| 4 | H | F | 0.0000 | |
| 5 | K | F | -2.6023 | |
| 6 | G | F | -1.3150 | |
| 7 | G | F | -1.0774 | |
| 1 | F | G | 0.1947 | |
| 2 | G | G | -0.2286 | |
| 3 | G | G | -0.9525 | |
| 4 | H | G | 0.0000 | |
| 5 | K | G | -3.1441 | |
| 6 | G | G | 0.0000 | |
| 7 | G | G | -1.2197 | |
| 1 | F | H | 0.5911 | |
| 2 | G | H | 0.0254 | |
| 3 | G | H | -0.9526 | |
| 4 | H | H | 0.0000 | |
| 5 | K | H | -2.9349 | |
| 6 | G | H | 0.0000 | |
| 7 | G | H | -1.4202 | |
| 1 | F | I | 0.1846 | |
| 2 | G | I | -0.2921 | |
| 3 | G | I | -1.0493 | |
| 4 | H | I | 0.0000 | |
| 5 | K | I | -3.1220 | |
| 6 | G | I | 0.0000 | |
| 7 | G | I | -1.3653 | |
| 1 | F | J | 0.0460 | |
| 2 | G | J | -0.2464 | |
| 3 | G | J | -1.0780 | |
| 4 | H | J | 0.0000 | |
| 5 | K | J | -3.0495 | |
| 6 | G | J | 0.0000 | |
| 7 | G | J | -1.4022 | |
| 1 | F | K | 0.0624 | |
| 2 | G | K | -0.2394 | |
| 3 | G | K | -1.0396 | |
| 4 | H | K | 0.0000 | |
| 5 | K | K | -3.1211 | |
| 6 | G | K | 0.0000 | |
| 7 | G | K | -1.3606 | |
| 1 | F | L | 0.5977 | |
| 2 | G | L | 0.1751 | |
| 3 | G | L | -0.7367 | |
| 4 | H | L | 0.0000 | |
| 5 | K | L | -2.7524 | |
| 6 | G | L | 0.0000 | |
| 7 | G | L | -1.2863 | |
| 1 | F | M | 0.2731 | |
| 2 | G | M | -0.0577 | |
| 3 | G | M | -0.7585 | |
| 4 | H | M | 0.0000 | |
| 5 | K | M | -2.7275 | |
| 6 | G | M | 0.0000 | |
| 7 | G | M | -1.2881 | |
| 1 | F | N | 0.5904 | |
| 2 | G | N | 0.2164 | |
| 3 | G | N | -0.6277 | |
| 4 | H | N | 0.0000 | |
| 5 | K | N | -2.5517 | |
| 6 | G | N | -1.5914 | |
| 7 | G | N | -1.0977 | |
| 1 | F | O | 1.4252 | |
| 2 | G | O | 0.2228 | |
| 3 | G | O | -0.6957 | |
| 4 | H | O | -1.9128 | |
| 5 | K | O | -2.7964 | |
| 6 | G | O | -1.8085 | |
| 7 | G | O | -1.0500 | |
| 1 | F | P | 1.4149 | |
| 2 | G | P | 0.1900 | |
| 3 | G | P | -0.7479 | |
| 4 | H | P | -1.7005 | |
| 5 | K | P | -2.6799 | |
| 6 | G | P | -1.6181 | |
| 7 | G | P | -0.9098 | |
| 1 | F | Q | 0.3244 | |
| 2 | G | Q | -0.0091 | |
| 3 | G | Q | -0.7027 | |
| 4 | H | Q | 0.0000 | |
| 5 | K | Q | -2.9195 | |
| 6 | G | Q | 0.0000 | |
| 7 | G | Q | -1.4556 | |
| 1 | F | R | -0.0614 | |
| 2 | G | R | -0.1711 | |
| 3 | G | R | -0.8852 | |
| 4 | H | R | 0.0000 | |
| 5 | K | R | -2.6959 | |
| 6 | G | R | 0.0000 | |
| 7 | G | R | -1.4436 | |
| 1 | F | S | -0.0659 | |
| 2 | G | S | -0.1995 | |
| 3 | G | S | -0.9611 | |
| 4 | H | S | 0.0000 | |
| 5 | K | S | -3.0660 | |
| 6 | G | S | 0.0000 | |
| 7 | G | S | -1.5024 | |
| 1 | F | T | -0.0975 | |
| 2 | G | T | -0.2050 | |
| 3 | G | T | -0.9797 | |
| 4 | H | T | 0.0000 | |
| 5 | K | T | -3.1865 | |
| 6 | G | T | -2.1390 | |
| 7 | G | T | -1.5135 |