| Chain sequence(s) |
B: SAEHKLEYVKETYHKWENGEDPSVDIFSPHFWYMFSTAYTEITGKPYHYTHFSIEKVRELTS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.3949 | |
| 2 | A | B | 0.0000 | |
| 3 | E | B | -2.8644 | |
| 4 | H | B | -2.6382 | |
| 5 | K | B | -1.8240 | |
| 6 | L | B | -2.2317 | |
| 7 | E | B | -3.2311 | |
| 8 | Y | B | -1.8858 | |
| 9 | V | B | 0.0000 | |
| 10 | K | B | -2.8634 | |
| 11 | E | B | -2.9332 | |
| 12 | T | B | -1.9790 | |
| 13 | Y | B | 0.0000 | |
| 14 | H | B | -2.6899 | |
| 15 | K | B | -3.1170 | |
| 16 | W | B | -2.2433 | |
| 17 | E | B | -2.0867 | |
| 18 | N | B | -2.7454 | |
| 19 | G | B | -2.5567 | |
| 20 | E | B | -3.1464 | |
| 21 | D | B | -2.4437 | |
| 22 | P | B | -1.6882 | |
| 23 | S | B | -1.1966 | |
| 24 | V | B | -1.2165 | |
| 25 | D | B | -1.3685 | |
| 26 | I | B | 0.0000 | |
| 27 | F | B | 1.4707 | |
| 28 | S | B | 0.1380 | |
| 29 | P | B | -0.0001 | |
| 30 | H | B | -0.4450 | |
| 31 | F | B | 0.0000 | |
| 32 | W | B | 0.0000 | |
| 33 | Y | B | 0.9314 | |
| 34 | M | B | 0.4459 | |
| 35 | F | B | 0.0000 | |
| 36 | S | B | -0.2412 | |
| 37 | T | B | -0.3206 | |
| 38 | A | B | 0.0000 | |
| 39 | Y | B | 0.0000 | |
| 40 | T | B | -1.6272 | |
| 41 | E | B | -2.1266 | |
| 42 | I | B | -0.6674 | |
| 43 | T | B | -1.0453 | |
| 44 | G | B | -1.6538 | |
| 45 | K | B | -2.2562 | |
| 46 | P | B | -1.4957 | |
| 47 | Y | B | 0.0000 | |
| 48 | H | B | -0.6359 | |
| 49 | Y | B | 0.6730 | |
| 50 | T | B | 0.2556 | |
| 51 | H | B | 0.0192 | |
| 52 | F | B | 1.5161 | |
| 53 | S | B | 0.0597 | |
| 54 | I | B | -0.8345 | |
| 55 | E | B | -2.6447 | |
| 56 | K | B | -2.2934 | |
| 57 | V | B | 0.0000 | |
| 58 | R | B | -3.2030 | |
| 59 | E | B | -2.8954 | |
| 60 | L | B | 0.0000 | |
| 61 | T | B | 0.0000 | |
| 62 | S | B | -1.2113 |